Factsheet for GSMUA_Achr5P09840_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
plasma membrane 3
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
MultiLoc:	plasma membrane
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr1P05260_001
GSMUA_Achr2P09100_001
GSMUA_Achr3P20680_001
GSMUA_Achr4P08990_001
GSMUA_Achr4P09000_001
GSMUA_Achr4P23000_001
GSMUA_Achr4P31540_001
GSMUA_Achr5P04480_001
GSMUA_Achr5P09770_001
GSMUA_Achr5P09840_001
GSMUA_Achr5P29000_001
GSMUA_Achr6P05630_001
GSMUA_Achr6P07280_001
GSMUA_Achr6P15180_001
GSMUA_Achr6P24240_001
GSMUA_Achr6P26910_001
GSMUA_Achr7P05210_001
GSMUA_Achr7P09360_001
GSMUA_Achr7P16100_001
GSMUA_Achr7P26970_001
GSMUA_Achr8P27260_001
GSMUA_Achr9P06470_001
GSMUA_Achr9P13300_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26650.1	GSMUA_Achr11P...	AT1G07430.1	17898163
AT2G26650.1	GSMUA_Achr5P29000_001	AT1G07430.1	17898163
AT2G26650.1	GSMUA_Achr6P15180_001	AT1G07430.1	17898163
AT2G26650.1	GSMUA_AchrUn_...	AT1G07430.1	17898163
AT2G26650.1	GSMUA_Achr4P23000_001	AT1G30270.1	16814720
AT2G26650.1	GSMUA_Achr4P31540_001	AT1G30270.1	16814720
AT2G26650.1	GSMUA_Achr4P23000_001	AT1G30270.1	17898163
AT2G26650.1	GSMUA_Achr4P31540_001	AT1G30270.1	17898163
AT2G26650.1	GSMUA_Achr10P...	AT2G25090.1	17898163
AT2G26650.1	GSMUA_Achr5P04480_001	AT2G25090.1	17898163
AT2G26650.1	GSMUA_Achr7P16100_001	AT2G25090.1	17898163
AT2G26650.1	GSMUA_Achr9P13300_001	AT2G25090.1	17898163
AT2G26650.1	GSMUA_Achr3P20680_001	AT2G26650.1	12678562
AT2G26650.1	GSMUA_Achr4P08990_001	AT2G26650.1	12678562
AT2G26650.1	GSMUA_Achr4P09000_001	AT2G26650.1	12678562
AT2G26650.1	GSMUA_Achr5P09840_001	AT2G26650.1	12678562
AT2G26650.1	GSMUA_AchrUn_...	AT2G26650.1	12678562
AT2G26650.1	GSMUA_Achr3P20680_001	AT2G26650.1	15299147
AT2G26650.1	GSMUA_Achr4P08990_001	AT2G26650.1	15299147
AT2G26650.1	GSMUA_Achr4P09000_001	AT2G26650.1	15299147
AT2G26650.1	GSMUA_Achr5P09840_001	AT2G26650.1	15299147
AT2G26650.1	GSMUA_AchrUn_...	AT2G26650.1	15299147
AT2G26650.1	GSMUA_Achr3P20680_001	AT2G26650.1	9218788
AT2G26650.1	GSMUA_Achr4P08990_001	AT2G26650.1	9218788
AT2G26650.1	GSMUA_Achr4P09000_001	AT2G26650.1	9218788
AT2G26650.1	GSMUA_Achr5P09840_001	AT2G26650.1	9218788
AT2G26650.1	GSMUA_AchrUn_...	AT2G26650.1	9218788
AT2G26650.1	GSMUA_Achr6P07280_001	AT4G22200.1	12678562
AT2G26650.1	GSMUA_Achr6P24240_001	AT4G22200.1	12678562
AT2G26650.1	GSMUA_Achr6P07280_001	AT4G22200.1	15299147
AT2G26650.1	GSMUA_Achr6P24240_001	AT4G22200.1	15299147
AT2G26650.1	GSMUA_Achr10P...	AT4G30960.1	17898163
AT2G26650.1	GSMUA_Achr7P05210_001	AT4G30960.1	17898163
AT2G26650.1	GSMUA_Achr7P26970_001	AT4G30960.1	17898163
AT2G26650.1	GSMUA_AchrUn_...	AT4G30960.1	17898163
AT2G26650.1	GSMUA_Achr1P05260_001	AT4G32650.1	12678562
AT2G26650.1	GSMUA_Achr5P09770_001	AT4G32650.1	12678562
AT2G26650.1	GSMUA_Achr1P05260_001	AT4G32650.1	15299147
AT2G26650.1	GSMUA_Achr5P09770_001	AT4G32650.1	15299147
AT2G26650.1	GSMUA_Achr10P...	AT5G46240.1	15299147
AT2G26650.1	GSMUA_Achr2P09100_001	AT5G46240.1	15299147
AT2G26650.1	GSMUA_Achr6P05630_001	AT5G46240.1	15299147
AT2G26650.1	GSMUA_Achr6P26910_001	AT5G46240.1	15299147
AT2G26650.1	GSMUA_Achr7P09360_001	AT5G46240.1	15299147
AT2G26650.1	GSMUA_Achr8P27260_001	AT5G46240.1	15299147
AT2G26650.1	GSMUA_Achr9P06470_001	AT5G46240.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P20680_001	Banana	cytosol, nucleus, plasma membrane	74.76	76.34
GSMUA_AchrUn_...	Banana	plasma membrane	73.41	76.11
GSMUA_Achr4P08990_001	Banana	cytosol, mitochondrion, plasma membrane	70.0	70.34
GSMUA_Achr4P09000_001	Banana	plasma membrane	47.2	69.23
Zm00001d044056_P003	Maize	plasma membrane, plastid	68.54	63.36
EES03354	Sorghum	plastid	68.17	63.16
VIT_11s0016g04750.t01	Wine grape	plasma membrane	67.07	63.07
PGSC0003DMT400002746	Potato	plasma membrane	67.07	62.93
Solyc12g006850.1.1	Tomato	plasma membrane	67.68	62.85
KRH03745	Soybean	plasma membrane	66.1	61.94
TraesCS3A01G233800.1	Wheat	plasma membrane	67.32	61.54
HORVU3Hr1G058300.1	Barley	plasma membrane	67.32	61.47
TraesCS3D01G219600.1	Wheat	plasma membrane	67.2	61.43
TraesCS3B01G265500.1	Wheat	plasma membrane	67.07	61.32
AT2G26650.1	Thale cress	plasma membrane	64.02	61.26
Zm00001d011473_P003	Maize	plastid	67.44	60.57
KRH56647	Soybean	plasma membrane	65.61	60.25
CDY35373	Canola	cytosol, plasma membrane, vacuole	62.56	59.65
CDY55714	Canola	cytosol, plasma membrane, vacuole	62.56	59.58
Bra032037.1-P	Field mustard	cytosol	62.44	59.53
Os01t0648000-01	Rice	plasma membrane	67.56	59.25
VIT_04s0008g04990.t01	Wine grape	mitochondrion	63.78	58.24
PGSC0003DMT400091020	Potato	peroxisome, plasma membrane	41.71	55.97
PGSC0003DMT400074787	Potato	cytosol, nucleus, plasma membrane	58.29	55.52
KRH61812	Soybean	plasma membrane	59.15	55.24
Solyc08g066990.2.1	Tomato	plasma membrane	57.68	54.87
KRH05105	Soybean	cytosol, plasma membrane, vacuole	57.8	54.73
CDX68851	Canola	plasma membrane	57.2	54.73
KRH52490	Soybean	plasma membrane	58.66	54.72
KRH16013	Soybean	plasma membrane	57.44	53.83
CDX75249	Canola	plasma membrane	57.2	53.54
Bra011351.1-P	Field mustard	cytosol	57.2	53.54
Solyc09g005220.1.1	Tomato	cytosol	18.66	53.5
AT2G25600.1	Thale cress	cytosol	57.8	53.38
AT4G32500.1	Thale cress	plasma membrane	57.2	53.3
Solyc05g017930.1.1	Tomato	nucleus, plasma membrane	9.27	53.15
Bra007785.1-P	Field mustard	cytosol	55.61	52.66
CDY11516	Canola	cytosol	56.22	52.57
CDX76746	Canola	cytosol	56.34	52.56
GSMUA_Achr7P09360_001	Banana	plasma membrane	39.39	49.69
GSMUA_Achr10P...	Banana	plasma membrane	38.66	48.25
GSMUA_Achr6P05630_001	Banana	cytosol, nucleus, plasma membrane	39.51	47.58
GSMUA_Achr6P26910_001	Banana	endoplasmic reticulum, peroxisome, plasma membrane	39.88	44.86
GSMUA_Achr8P27260_001	Banana	plasma membrane	39.51	44.69
GSMUA_Achr9P06470_001	Banana	plasma membrane	39.27	44.6
GSMUA_Achr1P05260_001	Banana	plasma membrane	34.15	44.23
GSMUA_Achr2P09100_001	Banana	plasma membrane, vacuole	39.39	43.41
GSMUA_Achr5P09770_001	Banana	plasma membrane	34.15	42.88
GSMUA_Achr6P24240_001	Banana	cytosol	41.59	42.62
GSMUA_Achr6P07280_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	40.0	39.81
GSMUA_Achr3P16730_001	Banana	plasma membrane	29.15	33.1
GSMUA_Achr8P22950_001	Banana	cytosol	20.37	30.87
GSMUA_Achr9P15840_001	Banana	cytosol, mitochondrion, plasma membrane, vacuole	28.78	27.93
GSMUA_Achr8P22960_001	Banana	nucleus, peroxisome, plasma membrane	10.12	27.67

Protein Annotations

Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005244	GO:GO:0005249
GO:GO:0005267	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811
GO:GO:0006813	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0034765
GO:GO:0055085	GO:GO:0071805	EnsemblPlantsGene:GSMUA_Achr5G09840_001	EnsemblPlants:GSMUA_Achr5P09840_001	EnsemblPlants:GSMUA_Achr5T09840_001	InterPro:IPR000595
InterPro:IPR002110	InterPro:IPR014710	InterPro:IPR020683	InterPro:IPR021789	InterPro:IPR036770	InterPro:Ion_trans_dom
InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	UniProt:M0SX63	PFAM:PF00027	PFAM:PF00520	PFAM:PF11834
PFAM:PF12796	PRINTS:PR01415	PRINTS:PR01463	PFscan:PS50042	PFscan:PS50088	PFscan:PS50297
PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF504	InterPro:RmlC-like_jellyroll	SMART:SM00100	SMART:SM00248
SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix	UniParc:UPI00029549A5	InterPro:cNMP-bd-like
InterPro:cNMP-bd_dom	SEG:seg	:	:	:	:

Description

Potassium channel AKT1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G09840_001]

Coordinates

chr5:-:7059592..7063293

Molecular Weight (calculated)

92025.2 Da

IEP (calculated)

6.211

GRAVY (calculated)

-0.056

Length

820 amino acids

Sequence
(BLAST)

001: MCGHQTERDL SRDGSHYSLS SGILPSLGAR SNRRVKLRSS IVSPYDRRYR TWETFLIVLV IYSAWVSPFE FGFLDNSKGS LALADNIVNA FFAVDIVLTF
101: FVAYLNRTTY LLVDDHKKIA VRYLTTWFIL DVASTIPSEI ALRILPSSLR SYGFFNMLRL WRLRRVSALF ARLEKDRSFN YFWVRCAKLI CVTLFAVHCA
201: GCFYYLLAAR YHDPSGTWIG ASMADFLERS LWDRYVTSMY WSITTLTTVG YGDLHAENTR EMIFATIYML FNLGLTAYLI GNMTNLVVHG TSRTRRYRDT
301: IQAATGFAQR NQIPERLQEQ MISHLSLKFR TDSEGLQQQE ILDSLPKAIR SSISHYLFYS LVQQVYLFRG VSHDLLFQLV SEMKGEYFPP REDVILQNEA
401: PTDFYILVTG SAELIDHRSG SEEASCLLND CDLVGEIGIL CYRPQLFTVR TRSLCQLLRL NRTVFLNLVQ SNVGDGTIII NNLLQYLKEQ MDDPLMEGLL
501: RDIETMLTRG RLELPLTLSF AVVRGDDLLL HQLLRRGLDP SESDNNGHTA LHIAASKGNE HCVRLLLDFG ADPNSLDSEG SVPLWEAILG KHEQVVKLLI
601: DNGAHLSAGD MGHFACTAAA QNNIELLEDI IRHGGDVTAE KKDGSTALHR AVCEGNPRLA EFLIQHGADM DKPDHHGWTP RSLADQQGHD EIKALFDVTV
701: VVVAVRGAGE ERAGTAGKLP QLAVWDHIGC QLQQQAEPQR PAVICCWSAE AYLVLLPDSL HELLDIGSKK FGFLASKAFT KDGAEIDDVK LIRDGDHIVV
801: AGDDSDGISA HGSERLSQST

Best Arabidopsis Sequence Match ( AT2G26650.1 )
(BLAST)

001: MRGGALLCGQ VQDEIEQLSR ESSHFSLSTG ILPSLGARSN RRVKLRRFVV SPYDHKYRIW EAFLVVLVVY TAWVSPFEFG FLRKPRPPLS ITDNIVNAFF
101: AIDIIMTFFV GYLDKSTYLI VDDRKQIAFK YLRSWFLLDL VSTIPSEAAM RISSQSYGLF NMLRLWRLRR VGALFARLEK DRNFNYFWVR CAKLVCVTLF
201: AVHCAACFYY LIAARNSNPA KTWIGANVAN FLEESLWMRY VTSMYWSITT LTTVGYGDLH PVNTKEMIFD IFYMLFNLGL TAYLIGNMTN LVVHGTSRTR
301: NFRDTIQAAS NFAHRNHLPP RLQDQMLAHL CLKYRTDSEG LQQQETLDAL PKAIRSSISH FLFYSLMDKV YLFRGVSNDL LFQLVSEMKA EYFPPKEDVI
401: LQNEAPTDFY ILVNGTADLV DVDTGTESIV REVKAGDIIG EIGVLCYRPQ LFTVRTKRLC QLLRMNRTTF LNIIQANVGD GTIIMNNLLQ HLKEMNDPVM
501: TNVLLEIENM LARGKMDLPL NLCFAAIRED DLLLHQLLKR GLDPNESDNN GRTPLHIAAS KGTLNCVLLL LEYHADPNCR DAEGSVPLWE AMVEGHEKVV
601: KVLLEHGSTI DAGDVGHFAC TAAEQGNLKL LKEIVLHGGD VTRPRATGTS ALHTAVCEEN IEMVKYLLEQ GADVNKQDMH GWTPRDLAEQ QGHEDIKALF
701: REKLHERRVH IETSSSVPIL KTGIRFLGRF TSEPNIRPAS REVSFRIRET RARRKTNNFD NSLFGILANQ SVPKNGLATV DEGRTGNPVR VTISCAEKDD
801: IAGKLVLLPG SFKELLELGS NKFGIVATKV MNKDNNAEID DVDVIRDGDH LIFATDS

Arabidopsis Description

AKT1Potassium channel AKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q38998]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.