Factsheet for GSMUA_Achr6P15180_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr2P02080_001
GSMUA_Achr3P20680_001
GSMUA_Achr4P08990_001
GSMUA_Achr4P09000_001
GSMUA_Achr4P10630_001
GSMUA_Achr4P15170_001
GSMUA_Achr4P19170_001
GSMUA_Achr4P23000_001
GSMUA_Achr4P31540_001
GSMUA_Achr5P09840_001
GSMUA_Achr5P29490_001
GSMUA_Achr6P00980_001
GSMUA_Achr6P07280_001
GSMUA_Achr6P24240_001
GSMUA_Achr6P32790_001
GSMUA_Achr7P09320_001
GSMUA_Achr8P14780_001
GSMUA_Achr8P21220_001
GSMUA_Achr9P04600_001
GSMUA_Achr9P17980_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G07430.1	GSMUA_Achr4P23000_001	AT1G30270.1	17898163
AT1G07430.1	GSMUA_Achr4P31540_001	AT1G30270.1	17898163
AT1G07430.1	GSMUA_Achr3P20680_001	AT2G26650.1	17898163
AT1G07430.1	GSMUA_Achr4P08990_001	AT2G26650.1	17898163
AT1G07430.1	GSMUA_Achr4P09000_001	AT2G26650.1	17898163
AT1G07430.1	GSMUA_Achr5P09840_001	AT2G26650.1	17898163
AT1G07430.1	GSMUA_AchrUn_...	AT2G26650.1	17898163
AT1G07430.1	GSMUA_Achr2P02080_001	AT3G06610.1	21798944
AT3G11410.1	GSMUA_Achr10P...	AT1G73000.1	19407142
AT3G11410.1	GSMUA_Achr6P00980_001	AT1G73000.1	19407142
AT3G11410.1	GSMUA_Achr7P09320_001	AT1G73000.1	19407142
AT3G11410.1	GSMUA_Achr10P...	AT2G26040.1	19407142
AT3G11410.1	GSMUA_Achr6P00980_001	AT2G26040.1	19407142
AT3G11410.1	GSMUA_Achr7P09320_001	AT2G26040.1	19407142
AT3G11410.1	GSMUA_AchrUn_...	AT2G33610.1	19033529
AT3G11410.1	GSMUA_Achr10P...	AT2G38310.1	19407142
AT3G11410.1	GSMUA_Achr11P...	AT2G38310.1	19407142
AT3G11410.1	GSMUA_Achr5P29490_001	AT2G38310.1	19407142
AT3G11410.1	GSMUA_Achr6P32790_001	AT2G38310.1	19407142
AT3G11410.1	GSMUA_Achr8P21220_001	AT2G38310.1	19407142
AT3G11410.1	GSMUA_Achr9P04600_001	AT2G38310.1	19407142
AT3G11410.1	GSMUA_Achr9P17980_001	AT2G38310.1	19407142
AT3G11410.1	GSMUA_AchrUn_...	AT2G38310.1	19407142
AT3G11410.1	GSMUA_Achr4P19170_001	AT4G17870.1	19407142
AT3G11410.1	GSMUA_Achr8P14780_001	AT4G17870.1	19407142
AT3G11410.1	GSMUA_Achr6P07280_001	AT4G22200.1	11181729
AT3G11410.1	GSMUA_Achr6P24240_001	AT4G22200.1	11181729
AT3G11410.1	GSMUA_Achr6P07280_001	AT4G22200.1	12034902
AT3G11410.1	GSMUA_Achr6P24240_001	AT4G22200.1	12034902
AT3G11410.1	GSMUA_Achr4P10630_001	AT5G45870.1	19407142
AT3G11410.1	GSMUA_Achr4P15170_001	AT5G45870.1	19407142
AT3G11410.1	GSMUA_Achr4P19170_001	AT5G46790.1	19407142
AT3G11410.1	GSMUA_Achr8P14780_001	AT5G46790.1	19407142
AT5G59220.1	GSMUA_Achr10P...	AT2G38310.1	19407142
AT5G59220.1	GSMUA_Achr11P...	AT2G38310.1	19407142
AT5G59220.1	GSMUA_Achr5P29490_001	AT2G38310.1	19407142
AT5G59220.1	GSMUA_Achr6P32790_001	AT2G38310.1	19407142
AT5G59220.1	GSMUA_Achr8P21220_001	AT2G38310.1	19407142
AT5G59220.1	GSMUA_Achr9P04600_001	AT2G38310.1	19407142
AT5G59220.1	GSMUA_Achr9P17980_001	AT2G38310.1	19407142
AT5G59220.1	GSMUA_AchrUn_...	AT2G38310.1	19407142
AT5G59220.1	GSMUA_Achr4P19170_001	AT4G17870.1	19407142
AT5G59220.1	GSMUA_Achr8P14780_001	AT4G17870.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	59.46	77.74
KXG35986	Sorghum	cytosol, peroxisome, plastid	34.05	62.07
GSMUA_Achr3P32040_001	Banana	cytosol, peroxisome, plastid	32.7	59.9
Zm00001d005609_P001	Maize	cytosol, mitochondrion, nucleus, plastid	54.86	58.0
GSMUA_Achr5P29000_001	Banana	cytosol	59.73	57.85
CDY18067	Canola	cytosol	9.19	57.63
GSMUA_Achr11P...	Banana	cytosol	61.35	57.47
TraesCS5A01G183600.1	Wheat	peroxisome	54.05	57.31
Zm00001d042886_P001	Maize	nucleus	62.97	57.11
EES01744	Sorghum	plastid	63.24	56.8
TraesCS5D01G188600.1	Wheat	peroxisome	53.51	56.73
TraesCS3A01G362200.1	Wheat	nucleus, plastid	59.73	56.52
HORVU3Hr1G085930.3	Barley	nucleus, plastid	59.73	56.23
TraesCS5B01G182000.1	Wheat	peroxisome	52.97	56.16
EER96576	Sorghum	cytosol	54.05	56.02
Zm00001d012401_P001	Maize	cytosol, mitochondrion, nucleus, plastid	62.43	55.93
TraesCS3D01G355900.1	Wheat	plastid	60.0	55.92
GSMUA_Achr11P...	Banana	cytosol	38.11	55.73
Zm00001d020100_P001	Maize	mitochondrion, nucleus, peroxisome, plastid	53.78	55.59
Zm00001d028574_P001	Maize	nucleus	58.38	54.55
HORVU4Hr1G060370.1	Barley	nucleus	58.92	54.5
Os09t0325700-01	Rice	cytosol	52.7	54.47
AT2G29380.1	Thale cress	nucleus	52.97	54.14
Os01t0846300-01	Rice	cytosol, mitochondrion, nucleus, plastid	60.27	53.86
TraesCS4B01G210100.1	Wheat	nucleus	58.38	53.2
EER92493	Sorghum	nucleus	57.57	53.12
GSMUA_Achr2P19990_001	Banana	cytosol	33.78	52.97
Os03t0268600-01	Rice	nucleus	57.57	52.72
TraesCS4A01G094300.1	Wheat	nucleus	58.11	52.57
CDY67257	Canola	nucleus	52.7	52.56
CDY45436	Canola	cytosol	51.89	52.46
TraesCS4D01G210900.1	Wheat	nucleus	58.11	52.44
CDY40181	Canola	cytosol	51.62	52.19
Bra018398.1-P	Field mustard	cytosol	51.62	52.19
VIT_06s0004g05460.t01	Wine grape	nucleus	55.41	52.16
TraesCS3B01G394600.3	Wheat	plastid	60.0	51.87
CDY67227	Canola	cytosol	51.89	51.75
GSMUA_Achr8P14370_001	Banana	cytosol	41.08	51.7
Bra002038.1-P	Field mustard	nucleus	52.97	51.58
VIT_13s0019g02200.t01	Wine grape	plastid	55.68	51.5
KRH15068	Soybean	cytosol	55.41	51.25
KRG97855	Soybean	cytosol	54.86	50.75
KRH31027	Soybean	cytosol	54.32	50.12
Bra002594.1-P	Field mustard	plastid	55.68	50.0
KRH73067	Soybean	cytosol	54.32	49.39
AT3G11410.1	Thale cress	cytosol	53.24	49.37
CDY01017	Canola	nucleus	52.16	49.11
AT5G59220.1	Thale cress	nucleus	54.59	48.91
Solyc05g052980.2.1	Tomato	nucleus	54.05	48.9
CDY33008	Canola	nucleus, plastid	52.16	48.86
CDY08530	Canola	nucleus	51.89	48.85
CDX80307	Canola	nucleus, plastid	52.16	48.74
Bra034845.1-P	Field mustard	nucleus	52.43	48.62
Solyc03g096670.2.1	Tomato	nucleus	53.24	48.52
PGSC0003DMT400043146	Potato	nucleus	53.51	48.29
CDY06705	Canola	nucleus	50.81	48.21
KXG22152	Sorghum	nucleus	59.73	47.63
PGSC0003DMT400069947	Potato	cytosol	53.51	47.37
KRH73525	Soybean	cytosol, mitochondrion, peroxisome, plastid	13.51	47.17
PGSC0003DMT400077989	Potato	cytosol	51.89	46.83
Solyc06g076400.2.1	Tomato	nucleus	51.62	46.59
Bra015579.1-P	Field mustard	nucleus	52.16	45.31
CDY10275	Canola	nucleus	51.89	44.65
AT1G07430.1	Thale cress	nucleus	52.7	44.12
GSMUA_Achr8P04220_001	Banana	cytosol, nucleus, peroxisome	40.27	44.08
Bra031574.1-P	Field mustard	nucleus	51.62	43.81
CDY06259	Canola	nucleus	51.35	43.58
GSMUA_Achr2P19980_001	Banana	vacuole	6.22	42.59
GSMUA_Achr11P...	Banana	cytosol	46.49	42.47
Bra030455.1-P	Field mustard	cytosol	17.57	40.88
GSMUA_Achr10P...	Banana	plastid	40.0	40.0
GSMUA_Achr2P09370_001	Banana	cytosol	34.86	39.81
GSMUA_Achr7P24000_001	Banana	cytosol	37.84	35.71
CDY36606	Canola	nucleus	23.51	34.8
GSMUA_Achr8P05700_001	Banana	cytosol, peroxisome, plasma membrane	38.11	32.34
GSMUA_Achr3P26270_001	Banana	cytosol, peroxisome, plastid	38.11	28.43
PGSC0003DMT400049695	Potato	extracellular	3.78	12.73
GSMUA_Achr2P08890_001	Banana	mitochondrion	23.78	8.16

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169
GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr6G15180_001	EnsemblPlants:GSMUA_Achr6P15180_001	EnsemblPlants:GSMUA_Achr6T15180_001	InterPro:IPR001932	InterPro:IPR036457
UniProt:M0T766	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF532	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI0002969331	SEG:seg	:	:	:	:

Description

Protein phosphatase 2C 3 [Source:GMGC_GENE;Acc:GSMUA_Achr6G15180_001]

Coordinates

chr6:-:10100392..10101880

Molecular Weight (calculated)

40022.9 Da

IEP (calculated)

6.811

GRAVY (calculated)

-0.168

Length

370 amino acids

Sequence
(BLAST)

001: MAEICCDVAG KAEPPVAPCE PSTRAVRRRR MVIRRFKFVA GVEAVDPAEE ARRKRQRLAC ELEDADFRTS RYGVMSVCGR RKEMEDAVSV LPDFSRRTCG
101: SVGGSHHFFG VYDGHGCSHV AALCSGRMHE FVADEMSRLG SVPPTPGAWT GLMERSFLRM DSAAAEALQQ GGRPTLCCRC ELHAPRCDNV GSTAVVAVVG
201: PTRIVVANCG DSRAVLCRGG APLPLSSDHK PDRPDELSRI EAAGGRVIYW EGARVLGVLA MSRAIGDGYL KPYVTSEPEV TVTERRDDDE FLILGSDGLW
301: DVVTNEMACD VVRTCLRAKA PLKEPIGEEV VGRDGRCSDR ACSDAAALLT KLALARQSAD NVSVVVVDLR

Best Arabidopsis Sequence Match ( AT1G07430.1 )
(BLAST)

001: MADICYEDET SACESRPLWS SRKWRIGVQR FRMSPSEMNP TASTTEEEDK SEGIYNKRNK QEEYDFMNCA SSSPSQSSPE EESVSLEDSD VSISDGNSSV
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA

Arabidopsis Description

AIP1Protein phosphatase 2C 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.