Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_05s0077g00910.t01 | Wine grape | cytosol | 82.3 | 84.55 |
| KRH11935 | Soybean | nucleus | 80.53 | 82.73 |
| KRH02360 | Soybean | nucleus | 80.53 | 82.73 |
| KRH50722 | Soybean | endoplasmic reticulum | 79.65 | 81.82 |
| KRH36967 | Soybean | cytosol | 78.76 | 80.91 |
| Solyc12g099240.1.1 | Tomato | cytosol | 77.88 | 80.0 |
| PGSC0003DMT400011768 | Potato | cytosol | 77.88 | 80.0 |
| TraesCS4A01G363500.1 | Wheat | cytosol | 86.73 | 77.17 |
| TraesCS5B01G509900.1 | Wheat | cytosol | 86.73 | 76.56 |
| TraesCS5D01G510000.1 | Wheat | cytosol | 86.73 | 76.56 |
| Os03t0832300-01 | Rice | plasma membrane | 85.84 | 76.38 |
| EER93155 | Sorghum | cytosol, mitochondrion, nucleus | 83.19 | 75.81 |
| CDY34941 | Canola | cytosol | 76.11 | 74.78 |
| CDY34938 | Canola | cytosol | 76.11 | 74.78 |
| Bra040280.1-P | Field mustard | cytosol | 76.11 | 74.78 |
| AT3G06610.1 | Thale cress | cytosol | 75.22 | 73.91 |
| Bra029592.1-P | Field mustard | cytosol | 74.34 | 73.04 |
| CDY24678 | Canola | cytosol | 74.34 | 73.04 |
| CDY05281 | Canola | cytosol | 74.34 | 73.04 |
| HORVU5Hr1G116650.1 | Barley | mitochondrion | 84.96 | 64.0 |
| Zm00001d042829_P001 | Maize | cytosol | 35.4 | 45.98 |
| Zm00001d038949_P001 | Maize | cytosol | 34.51 | 45.35 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P02080_001 | EnsemblPlants:GSMUA_Achr2T02080_001 | EnsemblPlantsGene:GSMUA_Achr2G02080_001 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | InterPro:HYPK_UBA | ncoils:Coil | PANTHER:PTHR31184 | SEG:seg |
| UniParc:UPI000294CAF4 | UniProt:M0S4E9 | MapMan:35.2 | : | : | : |
Description
huntingtin-interacting protein HYPK, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G02080_001]
Coordinates
chr2:+:7956663..7962007
Molecular Weight (calculated)
12448.8 Da
IEP (calculated)
4.816
GRAVY (calculated)
-0.464
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGEEAAAA AVAAVDSKDL QQQSKALDKL TDRVEDRQLD STRVQSAMAA LASSKEADWN AMRMREKELA AVKINPIDVD IIANELELDK KIAERTLREH
101: KGDAVAAVRY LLR
101: KGDAVAAVRY LLR
001: MEGAEEAGAE IAVDSKDLQQ QSKAFDKLTD RVEDRQLDSS RVQSAMASIA ASREADLNAK RLREKELASV KINPADVEFI VNELEIEKNV AERTLREHKG
101: DAVAATRQLL SRYPL
101: DAVAATRQLL SRYPL
Arabidopsis Description
DNA-binding enhancer protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9C901]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.