Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G510000.1 | Wheat | cytosol | 98.44 | 98.44 |
| TraesCS4A01G363500.1 | Wheat | cytosol | 92.97 | 93.7 |
| Os03t0832300-01 | Rice | plasma membrane | 87.5 | 88.19 |
| GSMUA_Achr2P02080_001 | Banana | cytosol | 76.56 | 86.73 |
| EER93155 | Sorghum | cytosol, mitochondrion, nucleus | 80.47 | 83.06 |
| Solyc12g099240.1.1 | Tomato | cytosol | 66.41 | 77.27 |
| VIT_05s0077g00910.t01 | Wine grape | cytosol | 66.41 | 77.27 |
| PGSC0003DMT400011768 | Potato | cytosol | 66.41 | 77.27 |
| KRH11935 | Soybean | nucleus | 65.62 | 76.36 |
| HORVU5Hr1G116650.1 | Barley | mitochondrion | 89.06 | 76.0 |
| KRH02360 | Soybean | nucleus | 64.84 | 75.45 |
| KRH50722 | Soybean | endoplasmic reticulum | 64.84 | 75.45 |
| KRH36967 | Soybean | cytosol | 62.5 | 72.73 |
| CDY34941 | Canola | cytosol | 63.28 | 70.43 |
| CDY34938 | Canola | cytosol | 63.28 | 70.43 |
| Bra040280.1-P | Field mustard | cytosol | 63.28 | 70.43 |
| AT3G06610.1 | Thale cress | cytosol | 63.28 | 70.43 |
| Bra029592.1-P | Field mustard | cytosol | 61.72 | 68.7 |
| CDY24678 | Canola | cytosol | 61.72 | 68.7 |
| CDY05281 | Canola | cytosol | 61.72 | 68.7 |
| Zm00001d042829_P001 | Maize | cytosol | 32.03 | 47.13 |
| Zm00001d038949_P001 | Maize | cytosol | 31.25 | 46.51 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G509900.1 | EnsemblPlantsGene:TraesCS5B01G509900 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | InterPro:HYPK_UBA | ncoils:Coil | PANTHER:PTHR31184 | SEG:seg | TIGR:cd14361 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:675874062..675876773
Molecular Weight (calculated)
13509.9 Da
IEP (calculated)
4.694
GRAVY (calculated)
-0.261
Length
128 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAAVDETAA AAAAAAVAAE GGAAAAAAEA DSKDLQQQSK ALDKLTDHVE DRQLDSSRVQ SAMAALASSK EADWNAMRLR EKELAAVKIN PTDVEIIANE
101: LELDKKIAER TLREHKGDAV AAVRFLLR
101: LELDKKIAER TLREHKGDAV AAVRFLLR
001: MEGAEEAGAE IAVDSKDLQQ QSKAFDKLTD RVEDRQLDSS RVQSAMASIA ASREADLNAK RLREKELASV KINPADVEFI VNELEIEKNV AERTLREHKG
101: DAVAATRQLL SRYPL
101: DAVAATRQLL SRYPL
Arabidopsis Description
DNA-binding enhancer protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9C901]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.