Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G509900.1 | Wheat | cytosol | 93.7 | 92.97 |
| TraesCS5D01G510000.1 | Wheat | cytosol | 93.7 | 92.97 |
| Os03t0832300-01 | Rice | plasma membrane | 89.76 | 89.76 |
| GSMUA_Achr2P02080_001 | Banana | cytosol | 77.17 | 86.73 |
| EER93155 | Sorghum | cytosol, mitochondrion, nucleus | 80.31 | 82.26 |
| Solyc12g099240.1.1 | Tomato | cytosol | 66.93 | 77.27 |
| VIT_05s0077g00910.t01 | Wine grape | cytosol | 66.93 | 77.27 |
| PGSC0003DMT400011768 | Potato | cytosol | 66.93 | 77.27 |
| KRH11935 | Soybean | nucleus | 66.14 | 76.36 |
| HORVU5Hr1G116650.1 | Barley | mitochondrion | 89.76 | 76.0 |
| KRH02360 | Soybean | nucleus | 65.35 | 75.45 |
| KRH50722 | Soybean | endoplasmic reticulum | 65.35 | 75.45 |
| KRH36967 | Soybean | cytosol | 62.99 | 72.73 |
| CDY34941 | Canola | cytosol | 63.78 | 70.43 |
| CDY34938 | Canola | cytosol | 63.78 | 70.43 |
| Bra040280.1-P | Field mustard | cytosol | 63.78 | 70.43 |
| AT3G06610.1 | Thale cress | cytosol | 63.78 | 70.43 |
| Bra029592.1-P | Field mustard | cytosol | 62.2 | 68.7 |
| CDY24678 | Canola | cytosol | 62.2 | 68.7 |
| CDY05281 | Canola | cytosol | 62.2 | 68.7 |
| Zm00001d042829_P001 | Maize | cytosol | 32.28 | 47.13 |
| Zm00001d038949_P001 | Maize | cytosol | 31.5 | 46.51 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G363500.1 | EnsemblPlantsGene:TraesCS4A01G363500 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | InterPro:HYPK_UBA | ncoils:Coil | PANTHER:PTHR31184 | SEG:seg | TIGR:cd14361 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4A:+:636661306..636664238
Molecular Weight (calculated)
13464.8 Da
IEP (calculated)
4.694
GRAVY (calculated)
-0.304
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAAVDETAA AAAAAVAAEG GPAAAAAEAD SKDLQQQSKA LDKLTDHVED RQLDSSRVQS AMAALASSKE ADWNAMRLRE KELAAVKINP TDVEIIANEL
101: ELDKKIAERT LREHKGDAVA AVRFLLR
101: ELDKKIAERT LREHKGDAVA AVRFLLR
001: MEGAEEAGAE IAVDSKDLQQ QSKAFDKLTD RVEDRQLDSS RVQSAMASIA ASREADLNAK RLREKELASV KINPADVEFI VNELEIEKNV AERTLREHKG
101: DAVAATRQLL SRYPL
101: DAVAATRQLL SRYPL
Arabidopsis Description
DNA-binding enhancer protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9C901]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.