Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G06610.1 | KRH52586 | AT1G22920.1 | 21798944 |
| AT3G06610.1 | KRH61926 | AT1G22920.1 | 21798944 |
| AT3G06610.1 | KRH52586 | AT1G71230.1 | 21798944 |
| AT3G06610.1 | KRH61926 | AT1G71230.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH11935 | Soybean | nucleus | 95.45 | 95.45 |
| KRH50722 | Soybean | endoplasmic reticulum | 87.27 | 87.27 |
| KRH02360 | Soybean | nucleus | 87.27 | 87.27 |
| VIT_05s0077g00910.t01 | Wine grape | cytosol | 86.36 | 86.36 |
| PGSC0003DMT400011768 | Potato | cytosol | 83.64 | 83.64 |
| Solyc12g099240.1.1 | Tomato | cytosol | 81.82 | 81.82 |
| GSMUA_Achr2P02080_001 | Banana | cytosol | 80.91 | 78.76 |
| Bra040280.1-P | Field mustard | cytosol | 80.0 | 76.52 |
| CDY34938 | Canola | cytosol | 80.0 | 76.52 |
| CDY34941 | Canola | cytosol | 80.0 | 76.52 |
| Bra029592.1-P | Field mustard | cytosol | 78.18 | 74.78 |
| CDY24678 | Canola | cytosol | 78.18 | 74.78 |
| CDY05281 | Canola | cytosol | 78.18 | 74.78 |
| AT3G06610.1 | Thale cress | cytosol | 76.36 | 73.04 |
| EER93155 | Sorghum | cytosol, mitochondrion, nucleus | 75.45 | 66.94 |
| Os03t0832300-01 | Rice | plasma membrane | 75.45 | 65.35 |
| TraesCS4A01G363500.1 | Wheat | cytosol | 72.73 | 62.99 |
| TraesCS5B01G509900.1 | Wheat | cytosol | 72.73 | 62.5 |
| TraesCS5D01G510000.1 | Wheat | cytosol | 72.73 | 62.5 |
| HORVU5Hr1G116650.1 | Barley | mitochondrion | 71.82 | 52.67 |
| Zm00001d038949_P001 | Maize | cytosol | 32.73 | 41.86 |
| Zm00001d042829_P001 | Maize | cytosol | 32.73 | 41.38 |
Protein Annotations
| EMBL:ACUP02005403 | EnsemblPlants:KRH36967 | EnsemblPlantsGene:GLYMA_09G035300 | EntrezGene:100499958 | InterPro:HYPK_UBA | ncoils:Coil |
| PANTHER:PTHR31184 | ProteinID:KRH36967 | ProteinID:KRH36967.1 | SEG:seg | UniParc:UPI0002338445 | UniProt:I1L0Q5 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:2944877..2947442
Molecular Weight (calculated)
12192.5 Da
IEP (calculated)
4.692
GRAVY (calculated)
-0.424
Length
110 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGEEGVEM MVDSKDLQQQ SKALDKLTDR VEDRQLDSTR VLEAMASIAA SAQADRNAMR IREKELAAVK INAADVDIIA NELELDIKVA ERTLREHKGD
101: AVAAIRHLLH
101: AVAAIRHLLH
001: MEGAEEAGAE IAVDSKDLQQ QSKAFDKLTD RVEDRQLDSS RVQSAMASIA ASREADLNAK RLREKELASV KINPADVEFI VNELEIEKNV AERTLREHKG
101: DAVAATRQLL SRYPL
101: DAVAATRQLL SRYPL
Arabidopsis Description
DNA-binding enhancer protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9C901]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.