Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040280.1-P | Field mustard | cytosol | 92.17 | 92.17 |
| CDY34938 | Canola | cytosol | 92.17 | 92.17 |
| CDY34941 | Canola | cytosol | 92.17 | 92.17 |
| CDY05281 | Canola | cytosol | 91.3 | 91.3 |
| CDY24678 | Canola | cytosol | 91.3 | 91.3 |
| Bra029592.1-P | Field mustard | cytosol | 91.3 | 91.3 |
| PGSC0003DMT400011768 | Potato | cytosol | 74.78 | 78.18 |
| KRH11935 | Soybean | nucleus | 74.78 | 78.18 |
| Solyc12g099240.1.1 | Tomato | cytosol | 73.91 | 77.27 |
| KRH36967 | Soybean | cytosol | 73.04 | 76.36 |
| VIT_05s0077g00910.t01 | Wine grape | cytosol | 73.04 | 76.36 |
| GSMUA_Achr2P02080_001 | Banana | cytosol | 73.91 | 75.22 |
| EER93155 | Sorghum | cytosol, mitochondrion, nucleus | 73.91 | 68.55 |
| Os03t0832300-01 | Rice | plasma membrane | 73.04 | 66.14 |
| TraesCS4A01G363500.1 | Wheat | cytosol | 70.43 | 63.78 |
| TraesCS5B01G509900.1 | Wheat | cytosol | 70.43 | 63.28 |
| TraesCS5D01G510000.1 | Wheat | cytosol | 70.43 | 63.28 |
| HORVU5Hr1G116650.1 | Barley | mitochondrion | 68.7 | 52.67 |
| Zm00001d042829_P001 | Maize | cytosol | 30.43 | 40.23 |
| Zm00001d038949_P001 | Maize | cytosol | 28.7 | 38.37 |
Protein Annotations
| MapMan:35.2 | EntrezGene:819840 | UniProt:A0A178VK92 | ProteinID:AAG51334.1 | ProteinID:AEE74422.1 | ArrayExpress:AT3G06610 |
| EnsemblPlantsGene:AT3G06610 | RefSeq:AT3G06610 | TAIR:AT3G06610 | RefSeq:AT3G06610-TAIR-G | EnsemblPlants:AT3G06610.1 | TAIR:AT3G06610.1 |
| EMBL:AY072362 | EMBL:AY088257 | EMBL:AY114729 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0008150 | InterPro:HYPK_UBA | RefSeq:NP_566288.1 | ProteinID:OAP06850.1 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31184 |
| UniProt:Q9C901 | UniParc:UPI00000AA448 | SEG:seg | : | : | : |
Description
DNA-binding enhancer protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9C901]
Coordinates
chr3:+:2060615..2062153
Molecular Weight (calculated)
12796.0 Da
IEP (calculated)
4.713
GRAVY (calculated)
-0.626
Length
115 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGAEEAGAE IAVDSKDLQQ QSKAFDKLTD RVEDRQLDSS RVQSAMASIA ASREADLNAK RLREKELASV KINPADVEFI VNELEIEKNV AERTLREHKG
101: DAVAATRQLL SRYPL
101: DAVAATRQLL SRYPL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.