Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G363500.1 | Wheat | cytosol | 76.0 | 89.76 |
| TraesCS5B01G509900.1 | Wheat | cytosol | 76.0 | 89.06 |
| TraesCS5D01G510000.1 | Wheat | cytosol | 76.0 | 89.06 |
| GSMUA_Achr2P02080_001 | Banana | cytosol | 64.0 | 84.96 |
| Os03t0832300-01 | Rice | plasma membrane | 71.33 | 84.25 |
| EER93155 | Sorghum | cytosol, mitochondrion, nucleus | 68.0 | 82.26 |
| VIT_05s0077g00910.t01 | Wine grape | cytosol | 56.0 | 76.36 |
| Solyc12g099240.1.1 | Tomato | cytosol | 56.0 | 76.36 |
| PGSC0003DMT400011768 | Potato | cytosol | 56.0 | 76.36 |
| KRH11935 | Soybean | nucleus | 55.33 | 75.45 |
| KRH02360 | Soybean | nucleus | 54.67 | 74.55 |
| KRH50722 | Soybean | endoplasmic reticulum | 54.67 | 74.55 |
| KRH36967 | Soybean | cytosol | 52.67 | 71.82 |
| CDY34941 | Canola | cytosol | 52.67 | 68.7 |
| CDY34938 | Canola | cytosol | 52.67 | 68.7 |
| Bra040280.1-P | Field mustard | cytosol | 52.67 | 68.7 |
| AT3G06610.1 | Thale cress | cytosol | 52.67 | 68.7 |
| Bra029592.1-P | Field mustard | cytosol | 51.33 | 66.96 |
| CDY24678 | Canola | cytosol | 51.33 | 66.96 |
| CDY05281 | Canola | cytosol | 51.33 | 66.96 |
| Zm00001d042829_P001 | Maize | cytosol | 26.67 | 45.98 |
| Zm00001d038949_P001 | Maize | cytosol | 26.0 | 45.35 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G116650.1 | EnsemblPlantsGene:HORVU5Hr1G116650 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | InterPro:HYPK_UBA | ncoils:Coil | PANTHER:PTHR31184 | SEG:seg | UniParc:UPI000B46A83C |
| UniProt:A0A287SV46 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:648511056..648513809
Molecular Weight (calculated)
16156.0 Da
IEP (calculated)
6.282
GRAVY (calculated)
-0.493
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: RTHTRQRERG IFPARVLGSA GRTEAMGAAV DETAAAAAVA AEGGPAAPAA DADSKDLQQQ SKALDKLTDH VEDRQLDSSR VQSAMAALAS SKEADWNAMR
101: LREKELSAVK INPTDVEIIA NELELDKKIA ERTLREHKGD AVAAVRFLLR
101: LREKELSAVK INPTDVEIIA NELELDKKIA ERTLREHKGD AVAAVRFLLR
001: MEGAEEAGAE IAVDSKDLQQ QSKAFDKLTD RVEDRQLDSS RVQSAMASIA ASREADLNAK RLREKELASV KINPADVEFI VNELEIEKNV AERTLREHKG
101: DAVAATRQLL SRYPL
101: DAVAATRQLL SRYPL
Arabidopsis Description
DNA-binding enhancer protein-like protein [Source:UniProtKB/TrEMBL;Acc:Q9C901]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.