Factsheet for GSMUA_Achr8P04220_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 2
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P32040_001	Banana	cytosol, peroxisome, plastid	41.72	69.8
GSMUA_Achr2P19990_001	Banana	cytosol	39.94	57.2
PGSC0003DMT400094534	Potato	cytosol	31.07	52.5
Zm00001d009626_P001	Maize	nucleus	56.51	50.93
HORVU3Hr1G059170.2	Barley	cytosol, nucleus	58.28	49.37
TraesCS3A01G237800.1	Wheat	plastid	57.4	49.24
Os05t0572700-02	Rice	cytosol	55.33	49.08
Os01t0656200-01	Rice	cytosol, nucleus, plastid	58.28	48.88
KRH77641	Soybean	plastid	46.75	48.77
GSMUA_Achr11P...	Banana	cytosol	36.39	48.62
OQU78453	Sorghum	nucleus	56.8	48.61
TraesCS1A01G411200.1	Wheat	nucleus	54.73	48.43
GSMUA_AchrUn_...	Banana	cytosol	40.53	48.41
TraesCS3D01G238000.1	Wheat	cytosol, nucleus, plastid	57.1	48.25
GSMUA_Achr2P19980_001	Banana	vacuole	7.69	48.15
TraesCS1D01G419000.1	Wheat	nucleus	53.55	48.01
TraesCS1B01G441400.1	Wheat	cytosol	54.44	47.92
HORVU1Hr1G090360.2	Barley	cytosol, mitochondrion, nucleus	55.62	47.59
TraesCS3B01G266200.1	Wheat	nucleus, peroxisome, plastid	58.28	47.58
GSMUA_Achr8P14370_001	Banana	cytosol	39.65	45.58
KRH27848	Soybean	nucleus	45.27	45.54
Zm00001d011495_P001	Maize	cytosol	52.96	45.43
GSMUA_Achr10P...	Banana	plastid	49.7	45.41
Zm00001d044015_P001	Maize	cytosol	54.73	45.12
KRG94219	Soybean	plastid	49.11	44.03
KRH16556	Soybean	plastid	49.41	43.26
VIT_16s0050g02680.t01	Wine grape	nucleus	37.28	42.71
Solyc03g007230.2.1	Tomato	cytosol	50.0	42.57
PGSC0003DMT400023517	Potato	nucleus	50.0	42.36
VIT_02s0025g01390.t01	Wine grape	cytosol, nucleus, plastid	47.63	40.97
GSMUA_Achr6P15180_001	Banana	cytosol	44.08	40.27
GSMUA_Achr5P29000_001	Banana	cytosol	45.27	40.05
GSMUA_Achr11P...	Banana	cytosol	46.15	39.49
Solyc08g082260.1.1	Tomato	nucleus	45.27	38.93
GSMUA_Achr2P09370_001	Banana	cytosol	36.98	38.58
VIT_02s0025g01550.t01	Wine grape	cytosol, nucleus, peroxisome	37.57	38.37
PGSC0003DMT400050448	Potato	cytosol	44.38	37.69
KXG33023	Sorghum	nucleus	52.66	37.55
GSMUA_Achr7P24000_001	Banana	cytosol	41.72	35.97
Solyc06g051940.2.1	Tomato	cytosol	46.15	35.29
GSMUA_Achr11P...	Banana	cytosol	42.01	35.06
GSMUA_Achr8P05700_001	Banana	cytosol, peroxisome, plasma membrane	40.24	31.19
GSMUA_Achr3P26270_001	Banana	cytosol, peroxisome, plastid	39.65	27.02
GSMUA_Achr2P08890_001	Banana	mitochondrion	24.26	7.6

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr8G04220_001	EnsemblPlants:GSMUA_Achr8P04220_001	EnsemblPlants:GSMUA_Achr8T04220_001	InterPro:IPR001932
InterPro:IPR036457	UniProt:M0TMH5	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF527	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI0002962099	SEG:seg	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G04220_001]

Coordinates

chr8:+:2850613..2851852

Molecular Weight (calculated)

36682.4 Da

IEP (calculated)

6.427

GRAVY (calculated)

-0.258

Length

338 amino acids

Sequence
(BLAST)

001: MEGEPEPPSN ESPDKIPCND HKTIRHRRLQ LRWIKAEASA GGCPTNRVKN RNRSFGSDAH KASKGIAPSL SHGSVSLIGR RREMEDAVTM APGFASVGTA
101: PSYDFFGVYD GHCGVSVAWA CRDRLHVVLA ETVAALGEWP TAEEQWREVM AASFSRVDGE LALKEREVGS TASVAVVGPE RIVVANCGDS RVVLSRGDKA
201: VPLSSDHKAD RPDEMKRVEA AGGIVINWDV YRVSGVLATS RSIGDHYLRP YVIAEPEVTV TNRTEEDELL VLASDGLWDV ISNEVVCKVA RQCLSGQLVR
301: KVPDGAREHR AKEAAVILAE LALSRGSRDN ISVVVVEL

Best Arabidopsis Sequence Match ( AT1G07430.1 )
(BLAST)

001: MADICYEDET SACESRPLWS SRKWRIGVQR FRMSPSEMNP TASTTEEEDK SEGIYNKRNK QEEYDFMNCA SSSPSQSSPE EESVSLEDSD VSISDGNSSV
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA

Arabidopsis Description

AIP1Protein phosphatase 2C 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.