CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044015_P001	Maize	cytosol	74.68	86.34
Zm00001d011495_P001	Maize	cytosol	67.3	80.96
GSMUA_Achr3P32040_001	Banana	cytosol, peroxisome, plastid	29.54	69.31
Os01t0656200-01	Rice	cytosol, nucleus, plastid	54.22	63.77
HORVU3Hr1G059170.2	Barley	cytosol, nucleus	53.16	63.16
TraesCS3D01G238000.1	Wheat	cytosol, nucleus, plastid	53.16	63.0
TraesCS3A01G237800.1	Wheat	plastid	52.11	62.69
TraesCS3B01G266200.1	Wheat	nucleus, peroxisome, plastid	52.74	60.39
OQU78453	Sorghum	nucleus	49.79	59.75
PGSC0003DMT400094534	Potato	cytosol	22.57	53.5
GSMUA_Achr8P04220_001	Banana	cytosol, nucleus, peroxisome	37.55	52.66
KXG35986	Sorghum	cytosol, peroxisome, plastid	21.52	50.25
KRH77641	Soybean	plastid	33.33	48.77
EER96576	Sorghum	cytosol	35.02	46.5
KRH27848	Soybean	nucleus	32.49	45.83
VIT_16s0050g02680.t01	Wine grape	nucleus	28.27	45.42
KRG94219	Soybean	plastid	35.23	44.3
Solyc03g007230.2.1	Tomato	cytosol	36.92	44.08
KRH16556	Soybean	plastid	35.44	43.52
PGSC0003DMT400023517	Potato	nucleus	36.5	43.36
VIT_02s0025g01390.t01	Wine grape	cytosol, nucleus, plastid	35.87	43.26
EES01744	Sorghum	plastid	35.87	41.26
EER92493	Sorghum	nucleus	34.39	40.65
VIT_02s0025g01550.t01	Wine grape	cytosol, nucleus, peroxisome	27.43	39.27
PGSC0003DMT400050448	Potato	cytosol	32.7	38.94
KXG22422	Sorghum	cytosol, nucleus, plastid	30.59	38.16
OQU87413	Sorghum	cytosol	30.8	38.12
Solyc06g051940.2.1	Tomato	cytosol	35.44	38.01
Solyc08g082260.1.1	Tomato	nucleus	31.43	37.91
KXG22152	Sorghum	nucleus	35.02	35.78
KXG22681	Sorghum	cytosol	30.59	33.88
EES00964	Sorghum	peroxisome, plasma membrane, vacuole	32.49	31.95
EES11811	Sorghum	plastid	32.07	31.08
OQU90183	Sorghum	mitochondrion	13.71	22.89
OQU86100	Sorghum	nucleus	15.19	18.05
KXG28797	Sorghum	golgi, plasma membrane, vacuole	19.41	8.62

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	UniProt:A0A1B6Q533	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169
GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	EnsemblPlants:KXG33023	ProteinID:KXG33023	ProteinID:KXG33023.1
ProteinID:OQU87259.1	ProteinID:OQU87260.1	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF527	SMART:SM00332
EnsemblPlantsGene:SORBI_3003G242200	SUPFAM:SSF81606	UniParc:UPI00081AE5A9	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:58153721..58167558

Molecular Weight (calculated)

50205.7 Da

IEP (calculated)

5.078

GRAVY (calculated)

-0.425

Length

474 amino acids

Sequence
(BLAST)

001: MSSSSEASTQ DHGVTAQAGA EEHGVPALEV QASAEEHVLP ALEAQDSGHD HGVPAFDEEP TPADTDRILA AVAQLARRRR LEARRLGRTA PAGAEGEAPK
101: RARPVSAGSS SRESAKVAPE PQEGASEVVP PGGWPKSVSH GGLSVIGRRR EMEDAFAVAA PFLLVKAAAG KEEEESGEGE EKEKEKDGGG GEAEAEAEAE
201: VEFFAVYDGH GGPRVADTCR ERLHVVLAEE VARLHLQLGK GGGGDDGGGV LRRWREAMEA CFARVDGEVV VVEREVNKNK NNAGDTVGCG STAVVAVVGP
301: RHIVVANCGD SRAVLSRGGV PMPLSSDHKP DRPDELERVE SAGGRVINWN GYRVLGVLAT SRAIGDYYMK PFISAEPEVT VTERTQKDEF IILASDGLWD
401: VMTNEVACKV ARNCLCGRAA AKYPDTVHGS SASDAASMLV EFAMSRGSTD NISVVVVELK RLKRWKGARQ NGRT

Best Arabidopsis Sequence Match ( AT1G72770.1 )
(BLAST)

001: MEEMTPAVAM TLSLAANTMC ESSPVEITQL KNVTDAADLL SDSENQSFCN GGTECTMEDV SELEEVGEQD LLKTLSDTRS GSSNVFDEDD VLSVVEDNSA
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GDRYLKPYVI PEPEVTFMPR SREDECLILA SDGLWDVMNN QEVCEIARRR ILMWHKKNGA PPLAERGKGI DPACQAAADY LSMLALQKGS KDNISIIVID
501: LKAQRKFKTR T

Arabidopsis Description

HAB1Protein phosphatase 2C 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.