CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009626_P001	Maize	nucleus	80.51	84.8
GSMUA_Achr3P32040_001	Banana	cytosol, peroxisome, plastid	40.0	78.22
Os05t0572700-02	Rice	cytosol	68.1	70.6
TraesCS1A01G411200.1	Wheat	nucleus	64.05	66.23
TraesCS1B01G441400.1	Wheat	cytosol	63.54	65.36
TraesCS1D01G419000.1	Wheat	nucleus	62.28	65.25
HORVU1Hr1G090360.2	Barley	cytosol, mitochondrion, nucleus	64.81	64.81
PGSC0003DMT400094534	Potato	cytosol	29.11	57.5
GSMUA_Achr8P04220_001	Banana	cytosol, nucleus, peroxisome	48.61	56.8
KXG35986	Sorghum	cytosol, peroxisome, plastid	29.11	56.65
KRH77641	Soybean	plastid	42.03	51.23
KXG33023	Sorghum	nucleus	59.75	49.79
EER96576	Sorghum	cytosol	44.81	49.58
KRH27848	Soybean	nucleus	40.76	47.92
VIT_16s0050g02680.t01	Wine grape	nucleus	35.44	47.46
KRH16556	Soybean	plastid	44.81	45.85
KRG94219	Soybean	plastid	43.54	45.62
Solyc03g007230.2.1	Tomato	cytosol	44.81	44.58
VIT_02s0025g01390.t01	Wine grape	cytosol, nucleus, plastid	44.05	44.27
PGSC0003DMT400023517	Potato	nucleus	44.56	44.11
EER92493	Sorghum	nucleus	43.04	42.39
EES01744	Sorghum	plastid	44.05	42.23
VIT_02s0025g01550.t01	Wine grape	cytosol, nucleus, peroxisome	34.68	41.39
PGSC0003DMT400050448	Potato	cytosol	41.52	41.21
Solyc08g082260.1.1	Tomato	nucleus	40.76	40.97
KXG22422	Sorghum	cytosol, nucleus, plastid	36.71	38.16
Solyc06g051940.2.1	Tomato	cytosol	42.53	38.01
OQU87413	Sorghum	cytosol	36.71	37.86
KXG22681	Sorghum	cytosol	38.99	35.98
KXG22152	Sorghum	nucleus	41.01	34.91
EES00964	Sorghum	peroxisome, plasma membrane, vacuole	40.76	33.4
EES11811	Sorghum	plastid	41.27	33.33
OQU90183	Sorghum	mitochondrion	16.46	22.89
OQU86100	Sorghum	nucleus	18.73	18.55
KXG28797	Sorghum	golgi, plasma membrane, vacuole	23.54	8.72

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	UniProt:A0A1Z5R3V2	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0006470	GO:GO:0007154	GO:GO:0007165
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009788	GO:GO:0009791
GO:GO:0009987	GO:GO:0010030	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
InterPro:IPR001932	InterPro:IPR036457	EnsemblPlants:OQU78453	ProteinID:OQU78453	ProteinID:OQU78453.1	PFAM:PF00481
InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF527	SMART:SM00331	SMART:SM00332	EnsemblPlantsGene:SORBI_3009G238600	SUPFAM:SSF81606
UniParc:UPI000B8BA8D2	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:57652425..57655397

Molecular Weight (calculated)

41750.2 Da

IEP (calculated)

8.369

GRAVY (calculated)

-0.323

Length

395 amino acids

Sequence
(BLAST)

001: MRETSAARDE GGPAVCKAVA GGNVDRKGGA SARRRRRLEL RRLGRATEGS PVPAKRIRSG SHRSSSSDSS LETAAAGCWP PRLSHGAVSV IGRRREMEDA
101: FAIALSFLAS DPSSPGAKDE QEQDFFAVYD GHGGARVAEA CRERMHVVLA EELGLRRGVG SDDLRWEEAM AASFARVDGE VTGGFSPPPK PPPQQTAADA
201: ADTNAGAGNL PYRTVGSTAV VAVVGQRRIV VANCGDSRAV LSRGGVAVPL STDHKPDRPD EMQRVEAAGG RVINWNGYRV LGVLATSRSI GDYYLKPYVS
301: AEPEVTVVER TEQDEFLILA SDGLWDVVSN EMACKIARNC LNGRAASKFP GSVAGRTAAD AAALLTELAM SRGSRDNISV VVVELQRLKT SPGAA

Best Arabidopsis Sequence Match ( AT1G07430.1 )
(BLAST)

001: MADICYEDET SACESRPLWS SRKWRIGVQR FRMSPSEMNP TASTTEEEDK SEGIYNKRNK QEEYDFMNCA SSSPSQSSPE EESVSLEDSD VSISDGNSSV
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA

Arabidopsis Description

AIP1Protein phosphatase 2C 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.