Factsheet for TraesCS1D01G419000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G411200.1	Wheat	nucleus	95.23	93.98
TraesCS1B01G441400.1	Wheat	cytosol	95.23	93.49
HORVU1Hr1G090360.2	Barley	cytosol, mitochondrion, nucleus	92.84	88.61
GSMUA_Achr3P32040_001	Banana	cytosol, peroxisome, plastid	40.05	74.75
Os05t0572700-02	Rice	cytosol	68.97	68.24
Zm00001d009626_P001	Maize	nucleus	64.99	65.33
OQU78453	Sorghum	nucleus	65.25	62.28
TraesCS3D01G238000.1	Wheat	cytosol, nucleus, plastid	62.86	59.25
PGSC0003DMT400094534	Potato	cytosol	29.97	56.5
GSMUA_Achr8P04220_001	Banana	cytosol, nucleus, peroxisome	48.01	53.55
KRH77641	Soybean	plastid	43.24	50.31
KRH27848	Soybean	nucleus	42.44	47.62
TraesCS5D01G188600.1	Wheat	peroxisome	43.5	46.99
VIT_16s0050g02680.t01	Wine grape	nucleus	35.28	45.08
KRG94219	Soybean	plastid	44.3	44.3
KRH16556	Soybean	plastid	45.09	44.04
VIT_02s0025g01390.t01	Wine grape	cytosol, nucleus, plastid	45.62	43.77
Solyc03g007230.2.1	Tomato	cytosol	44.3	42.07
PGSC0003DMT400023517	Potato	nucleus	44.03	41.6
TraesCS3D01G355900.1	Wheat	plastid	42.97	40.81
VIT_02s0025g01550.t01	Wine grape	cytosol, nucleus, peroxisome	35.28	40.18
TraesCS4D01G210900.1	Wheat	nucleus	43.5	40.0
PGSC0003DMT400050448	Potato	cytosol	41.91	39.7
Solyc08g082260.1.1	Tomato	nucleus	40.85	39.19
TraesCS7D01G042600.1	Wheat	cytosol	33.69	37.03
TraesCS1D01G363500.1	Wheat	cytosol	37.14	36.65
Solyc06g051940.2.1	Tomato	cytosol	42.44	36.2
TraesCS1D01G449700.1	Wheat	cytosol	38.73	35.61
TraesCS7D01G042300.1	Wheat	cytosol	34.48	35.14
TraesCS3D01G249000.1	Wheat	cytosol	35.28	35.09
TraesCS2D01G000300.1	Wheat	cytosol	41.64	34.58
TraesCS3D01G153200.1	Wheat	nucleus, peroxisome, plastid	29.71	31.91
TraesCS3D01G212100.1	Wheat	peroxisome, plasma membrane, vacuole	39.79	31.51
TraesCS3D01G153000.1	Wheat	peroxisome	24.4	30.07
TraesCS7D01G390600.1	Wheat	plasma membrane	23.61	8.34

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0006470	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009719	GO:GO:0009788	GO:GO:0009791	GO:GO:0009987	GO:GO:0010030
GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481
InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746
PANTHER:PTHR13832	PANTHER:PTHR13832:SF527	SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS1D01G419000
EnsemblPlants:TraesCS1D01G419000.1	TIGR:cd00143	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1D:-:476208135..476210193

Molecular Weight (calculated)

39578.6 Da

IEP (calculated)

7.430

GRAVY (calculated)

-0.252

Length

377 amino acids

Sequence
(BLAST)

001: MRQAVGAGEE GLSRKVVVAA GDADGATAAR RRRRHGRKVA SGEVEPARKA TDGSESESSA DVGRGIWLPA SLSHGAVSVI GRRREMEDAV AVERTFLASP
101: SSCEGGDEGG GGEEDFFAVY DGHGGARVAE ACRERMHVVL AEEVGRLRCR PGARGWKEAL EASFARVDGE VVAGAGADDG EESRSRTVGS TAVVAVVGRR
201: RIVVANCGDS RAVLSRGGVA VPLSTDHKPD RPDELQRVEA AGGRVINWNG SRVLGVLSTS RSIGDYYLKP YVSAEPEVMA VERTGKDEFL VLASDGLWDV
301: VSNQEACRVA RSCLTGRAAA AFPESVSGRS AADAAALLAE LAITRGSKDN ISVVVVELKR LKSRVGRRAA IGSEVQM

Best Arabidopsis Sequence Match ( AT1G72770.1 )
(BLAST)

001: MEEMTPAVAM TLSLAANTMC ESSPVEITQL KNVTDAADLL SDSENQSFCN GGTECTMEDV SELEEVGEQD LLKTLSDTRS GSSNVFDEDD VLSVVEDNSA
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GDRYLKPYVI PEPEVTFMPR SREDECLILA SDGLWDVMNN QEVCEIARRR ILMWHKKNGA PPLAERGKGI DPACQAAADY LSMLALQKGS KDNISIIVID
501: LKAQRKFKTR T

Arabidopsis Description

HAB1Protein phosphatase 2C 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.