Factsheet for TraesCS3D01G153200.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus

Predictor Summary:

peroxisome 1
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, peroxisome, plastid
Any Predictor:	nucleus, peroxisome, plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G171100.1	Wheat	peroxisome	94.02	94.02
TraesCS3D01G153000.1	Wheat	peroxisome	39.6	45.42
TraesCS1D01G419000.1	Wheat	nucleus	31.91	29.71
TraesCS5D01G188600.1	Wheat	peroxisome	28.21	28.37
TraesCS1D01G363500.1	Wheat	cytosol	30.48	28.01
TraesCS3D01G238000.1	Wheat	cytosol, nucleus, plastid	31.05	27.25
TraesCS3D01G249000.1	Wheat	cytosol	28.21	26.12
TraesCS4D01G210900.1	Wheat	nucleus	29.91	25.61
TraesCS3D01G355900.1	Wheat	plastid	28.77	25.44
TraesCS1D01G449700.1	Wheat	cytosol	29.63	25.37
TraesCS7D01G042600.1	Wheat	cytosol	22.79	23.32
TraesCS7D01G042300.1	Wheat	cytosol	24.5	23.24
TraesCS2D01G000300.1	Wheat	cytosol	29.06	22.47
TraesCS3D01G212100.1	Wheat	peroxisome, plasma membrane, vacuole	28.77	21.22
Os04t0167900-00	Rice	cytosol	12.25	20.09
OQU86100	Sorghum	nucleus	22.79	20.05
TraesCS7D01G390600.1	Wheat	plasma membrane	19.37	6.37
Zm00001d007532_P001	Maize	cytosol	0.57	2.27

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF527	SMART:SM00332
SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS3D01G153200	EnsemblPlants:TraesCS3D01G153200.1	TIGR:cd00143	SEG:seg	:

Description

No Description!

Coordinates

chr3D:-:120099941..120103190

Molecular Weight (calculated)

36974.8 Da

IEP (calculated)

6.056

GRAVY (calculated)

-0.025

Length

351 amino acids

Sequence
(BLAST)

001: MPTNGEAAAA ETAAPAGPSS LGWGWGSCPA LYVSYGLSAL KGRQPELTGA LAAVPSFTVL SPPMGLDYFG VFDGHSGAAV ANYLTERLHG VIADQILREL
101: VAEAPRFLHG PQGDVERWWR TAMADAFQTV DAELLEGAGG VDASVAGATA LVALVLEEYV VLANCGVSRA VISRGGEILQ LTSEHRPNRP DAKQRVENGG
201: GRVDESTNTV DEFLPTSRAF GSYLYKQYMI AEPKVTAVGR DPRDEFLILA TAGLWDSVSP VEACRVVERK LRSRSRSAVA WGTAADSNRV SATMLAKELA
301: QHAVRAGSTG NASVIVVLFR DDPVATASPA PVLASGRVQR PRRGCLSCGS P

Best Arabidopsis Sequence Match ( AT4G26080.1 )
(BLAST)

001: MEEVSPAIAG PFRPFSETQM DFTGIRLGKG YCNNQYSNQD SENGDLMVSL PETSSCSVSG SHGSESRKVL ISRINSPNLN MKESAAADIV VVDISAGDEI
101: NGSDITSEKK MISRTESRSL FEFKSVPLYG FTSICGRRPE MEDAVSTIPR FLQSSSGSML DGRFDPQSAA HFFGVYDGHG GSQVANYCRE RMHLALAEEI
201: AKEKPMLCDG DTWLEKWKKA LFNSFLRVDS EIESVAPETV GSTSVVAVVF PSHIFVANCG DSRAVLCRGK TALPLSVDHK PDREDEAARI EAAGGKVIQW
301: NGARVFGVLA MSRSIGDRYL KPSIIPDPEV TAVKRVKEDD CLILASDGVW DVMTDEEACE MARKRILLWH KKNAVAGDAS LLADERRKEG KDPAAMSAAE
401: YLSKLAIQRG SKDNISVVVV DLKPRRKLKS KPLN

Arabidopsis Description

ABI1Protein phosphatase 2C 56 [Source:UniProtKB/Swiss-Prot;Acc:P49597]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.