Factsheet for GSMUA_Achr2P19990_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P19980_001	Banana	vacuole	22.46	98.15
GSMUA_Achr3P32040_001	Banana	cytosol, peroxisome, plastid	52.97	61.88
GSMUA_Achr10P...	Banana	plastid	80.51	51.35
PGSC0003DMT400094534	Potato	cytosol	41.95	49.5
GSMUA_AchrUn_...	Banana	cytosol	52.54	43.82
GSMUA_Achr11P...	Banana	cytosol	46.19	43.08
GSMUA_Achr8P04220_001	Banana	cytosol, nucleus, peroxisome	57.2	39.94
GSMUA_Achr8P14370_001	Banana	cytosol	49.58	39.8
KRH77641	Soybean	plastid	52.97	38.58
KRH27848	Soybean	nucleus	52.12	36.61
VIT_16s0050g02680.t01	Wine grape	nucleus	44.49	35.59
KRG94219	Soybean	plastid	55.93	35.01
KRH16556	Soybean	plastid	56.36	34.46
VIT_02s0025g01550.t01	Wine grape	cytosol, nucleus, peroxisome	47.46	33.84
GSMUA_Achr6P15180_001	Banana	cytosol	52.97	33.78
Solyc03g007230.2.1	Tomato	cytosol	54.66	32.49
GSMUA_Achr2P09370_001	Banana	cytosol	44.07	32.1
VIT_02s0025g01390.t01	Wine grape	cytosol, nucleus, plastid	53.39	32.06
GSMUA_Achr5P29000_001	Banana	cytosol	51.69	31.94
PGSC0003DMT400023517	Potato	nucleus	53.81	31.83
GSMUA_Achr11P...	Banana	cytosol	52.97	31.65
Solyc08g082260.1.1	Tomato	nucleus	50.42	30.28
PGSC0003DMT400050448	Potato	cytosol	49.58	29.4
GSMUA_Achr7P24000_001	Banana	cytosol	47.46	28.57
GSMUA_Achr11P...	Banana	cytosol	48.73	28.4
Solyc06g051940.2.1	Tomato	cytosol	50.85	27.15
GSMUA_Achr8P05700_001	Banana	cytosol, peroxisome, plasma membrane	47.03	25.46
GSMUA_Achr3P26270_001	Banana	cytosol, peroxisome, plastid	45.76	21.77
GSMUA_Achr2P08890_001	Banana	mitochondrion	32.2	7.04

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
EnsemblPlantsGene:GSMUA_Achr2G19990_001	EnsemblPlants:GSMUA_Achr2P19990_001	EnsemblPlants:GSMUA_Achr2T19990_001	InterPro:IPR001932	InterPro:IPR036457	UniProt:M0S9J0
PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF527	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000295825C
SEG:seg	:	:	:	:	:

Description

Probable protein phosphatase 2C 8 [Source:GMGC_GENE;Acc:GSMUA_Achr2G19990_001]

Coordinates

chr2:+:19928958..19933113

Molecular Weight (calculated)

24823.9 Da

IEP (calculated)

4.961

GRAVY (calculated)

0.250

Length

236 amino acids

Sequence
(BLAST)

001: MEDAVTEVTG LAATAAGAGG YAYFAVYDGH GGAMGPEMWR RALEAGFARV DAEVMEAARA MKKGMVGSTA VVAVVAEKWI VVANCGDSRA VLSRGGVAVP
101: LSIDHKPDRP DELRRVEALG GRILCWDCPR VLGVLSTSRS FGDYLLKPYV SSDPELTVTG RTEKDEFLIL ASDGLWDVIS SEMACRVIGK CLEVLASDGY
201: PCGVANSAAK EAAAVLVRLA ISRGSVDNIS VVVVKL

Best Arabidopsis Sequence Match ( AT1G07430.1 )
(BLAST)

001: MADICYEDET SACESRPLWS SRKWRIGVQR FRMSPSEMNP TASTTEEEDK SEGIYNKRNK QEEYDFMNCA SSSPSQSSPE EESVSLEDSD VSISDGNSSV
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA

Arabidopsis Description

AIP1Protein phosphatase 2C 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.