Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
29344831
|
gfp PMID:
29344831
doi
Maize Research Institute, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China., Maize Research Institute, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China. aumdyms@sicau.edu.cn., Shanghai Center for Plant Stress Biology, and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China., Shanghai Center for Plant Stress Biology, and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China. zhaoyang@sibs.ac.cn.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d012401_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 91.42 | 90.31 |
| TraesCS3A01G362200.1 | Wheat | nucleus, plastid | 74.02 | 77.24 |
| HORVU3Hr1G085930.3 | Barley | nucleus, plastid | 72.79 | 75.57 |
| TraesCS3D01G355900.1 | Wheat | plastid | 73.53 | 75.57 |
| Os01t0846300-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 75.0 | 73.91 |
| TraesCS3B01G394600.3 | Wheat | plastid | 73.77 | 70.33 |
| GSMUA_AchrUn_... | Banana | cytosol | 46.81 | 67.49 |
| GSMUA_Achr6P15180_001 | Banana | cytosol | 57.11 | 62.97 |
| CDY18067 | Canola | cytosol | 8.58 | 59.32 |
| Zm00001d005609_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 49.75 | 58.0 |
| Zm00001d028574_P001 | Maize | nucleus | 55.15 | 56.82 |
| Zm00001d020100_P001 | Maize | mitochondrion, nucleus, peroxisome, plastid | 48.77 | 55.59 |
| AT2G29380.1 | Thale cress | nucleus | 47.55 | 53.59 |
| CDY67257 | Canola | nucleus | 47.3 | 52.02 |
| CDY67227 | Canola | cytosol | 46.81 | 51.48 |
| Bra018398.1-P | Field mustard | cytosol | 46.08 | 51.37 |
| CDY40181 | Canola | cytosol | 46.08 | 51.37 |
| CDY45436 | Canola | cytosol | 46.08 | 51.37 |
| Solyc05g052980.2.1 | Tomato | nucleus | 51.47 | 51.34 |
| Bra002038.1-P | Field mustard | nucleus | 47.79 | 51.32 |
| KRH15068 | Soybean | cytosol | 49.75 | 50.75 |
| VIT_06s0004g05460.t01 | Wine grape | nucleus | 48.77 | 50.64 |
| VIT_13s0019g02200.t01 | Wine grape | plastid | 49.26 | 50.25 |
| KRH73067 | Soybean | cytosol | 50.0 | 50.12 |
| KRG97855 | Soybean | cytosol | 49.02 | 50.0 |
| KRH31027 | Soybean | cytosol | 49.02 | 49.88 |
| PGSC0003DMT400069947 | Potato | cytosol | 50.74 | 49.52 |
| Solyc03g096670.2.1 | Tomato | nucleus | 49.26 | 49.51 |
| CDY06705 | Canola | nucleus | 47.3 | 49.49 |
| AT3G11410.1 | Thale cress | cytosol | 48.04 | 49.12 |
| CDY08530 | Canola | nucleus | 47.3 | 49.11 |
| CDY01017 | Canola | nucleus | 47.3 | 49.11 |
| PGSC0003DMT400043146 | Potato | nucleus | 49.02 | 48.78 |
| Bra034845.1-P | Field mustard | nucleus | 47.3 | 48.37 |
| Bra002594.1-P | Field mustard | plastid | 47.3 | 46.84 |
| CDX80307 | Canola | nucleus, plastid | 44.85 | 46.21 |
| CDY33008 | Canola | nucleus, plastid | 44.61 | 46.08 |
| Bra015579.1-P | Field mustard | nucleus | 48.04 | 46.01 |
| AT5G59220.1 | Thale cress | nucleus | 46.57 | 46.0 |
| CDY10275 | Canola | nucleus | 48.28 | 45.81 |
| PGSC0003DMT400077989 | Potato | cytosol | 45.83 | 45.61 |
| KRH73525 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 11.76 | 45.28 |
| Solyc06g076400.2.1 | Tomato | nucleus | 45.1 | 44.88 |
| AT1G07430.1 | Thale cress | nucleus | 48.04 | 44.34 |
| Zm00001d009626_P001 | Maize | nucleus | 40.2 | 43.73 |
| CDY06259 | Canola | nucleus | 46.57 | 43.58 |
| Bra031574.1-P | Field mustard | nucleus | 46.57 | 43.58 |
| Zm00001d011495_P001 | Maize | cytosol | 41.42 | 42.89 |
| Zm00001d044015_P001 | Maize | cytosol | 41.67 | 41.46 |
| Bra030455.1-P | Field mustard | cytosol | 15.93 | 40.88 |
| Zm00001d025055_P001 | Maize | cytosol | 44.12 | 38.79 |
| Zm00001d011132_P001 | Maize | cytosol, nucleus | 13.97 | 38.26 |
| Zm00001d038846_P001 | Maize | cytosol, nucleus | 34.56 | 38.11 |
| Zm00001d009747_P001 | Maize | cytosol | 37.5 | 36.17 |
| Zm00001d039163_P002 | Maize | cytosol | 37.25 | 35.43 |
| CDY36606 | Canola | nucleus | 21.08 | 34.4 |
| Zm00001d011202_P002 | Maize | cytosol, peroxisome, plastid | 36.52 | 34.02 |
| Zm00001d011131_P001 | Maize | cytosol | 23.04 | 33.33 |
| Zm00001d044301_P001 | Maize | cytosol, nucleus | 37.01 | 31.2 |
| Zm00001d004357_P001 | Maize | nucleus | 41.42 | 31.07 |
| PGSC0003DMT400049695 | Potato | extracellular | 3.92 | 14.55 |
| Zm00001d007529_P001 | Maize | nucleus | 18.14 | 14.51 |
| Zm00001d007528_P001 | Maize | extracellular, vacuole | 5.64 | 9.06 |
| Zm00001d007554_P001 | Maize | cytosol | 0.25 | 0.41 |
| Zm00001d007558_P001 | Maize | cytosol | 0.0 | 0.0 |
| Zm00001d007533_P001 | Maize | extracellular | 0.0 | 0.0 |
| Zm00001d007532_P001 | Maize | cytosol | 0.0 | 0.0 |
| Zm00001d007530_P001 | Maize | cytosol | 0.0 | 0.0 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | EntrezGene:100282657 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 | UniProt:A0A1D6N7C4 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 | GO:GO:0046872 | InterPro:IPR001932 |
| InterPro:IPR036457 | ProteinID:ONM36489.1 | PFAM:PF00481 | InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf |
| InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF532 | SMART:SM00332 |
| SUPFAM:SSF81606 | TMHMM:TMhelix | UniParc:UPI0002219D6C | EnsemblPlantsGene:Zm00001d042886 | EnsemblPlants:Zm00001d042886_P001 | EnsemblPlants:Zm00001d042886_T001 |
| SEG:seg | : | : | : | : | : |
Description
protein phosphatase homolog3 protein phosphatase homolog3
Coordinates
chr3:-:182899703..182901648
Molecular Weight (calculated)
43282.1 Da
IEP (calculated)
5.921
GRAVY (calculated)
-0.202
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEICCEEAK STPATAVAAA SVSATAAAAA AVAVASSALE RRRRRLEMRR FRVASDPEEL VAEDVRAAKR QRLARTLSGS CPDAGSDSDR PALPRYGVTS
101: VCGRRREMED TVSIRPDFLP GTSKHNFFGV FDGHGCSHVA TMCQDNMHEV VADEHTKAAS GEETAWKGVM ERSFSRLDEQ AASWATSRSR DEPACRCEQQ
201: MPLRCDHVGS TAVVAVVSPS HVVVANAGDS RAVLSRGGVP VPLSVDHKPD RPDELARIEA AGGRVIYWDG ARVLGVLAMS RAIGDRYLKP FVSSEPEVTV
301: TERTDDDECL ILASDGLWDV VTNEMACEVV RACFRSNGPP APAARPNGVA LPAAGAGAED GSAVVKGVGK EDSDKACSDA AMLLAKLALA RRSADNVSVV
401: VVDLRRGI
101: VCGRRREMED TVSIRPDFLP GTSKHNFFGV FDGHGCSHVA TMCQDNMHEV VADEHTKAAS GEETAWKGVM ERSFSRLDEQ AASWATSRSR DEPACRCEQQ
201: MPLRCDHVGS TAVVAVVSPS HVVVANAGDS RAVLSRGGVP VPLSVDHKPD RPDELARIEA AGGRVIYWDG ARVLGVLAMS RAIGDRYLKP FVSSEPEVTV
301: TERTDDDECL ILASDGLWDV VTNEMACEVV RACFRSNGPP APAARPNGVA LPAAGAGAED GSAVVKGVGK EDSDKACSDA AMLLAKLALA RRSADNVSVV
401: VVDLRRGI
001: MADICYEDET SACESRPLWS SRKWRIGVQR FRMSPSEMNP TASTTEEEDK SEGIYNKRNK QEEYDFMNCA SSSPSQSSPE EESVSLEDSD VSISDGNSSV
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA
Arabidopsis Description
AIP1Protein phosphatase 2C 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.