Factsheet for Bra030455.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
peroxisome 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra010783.1-P
Bra029592.1-P
Bra032037.1-P
Bra032374.1-P
Bra040280.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G07430.1	Bra010783.1-P	AT1G30270.1	17898163
AT1G07430.1	Bra032374.1-P	AT1G30270.1	17898163
AT1G07430.1	Bra032037.1-P	AT2G26650.1	17898163
AT1G07430.1	Bra029592.1-P	AT3G06610.1	21798944
AT1G07430.1	Bra040280.1-P	AT3G06610.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18067	Canola	cytosol	18.87	50.85
GSMUA_AchrUn_...	Banana	cytosol	41.51	23.32
Bra031574.1-P	Field mustard	nucleus	63.52	23.17
KXG35986	Sorghum	cytosol, peroxisome, plastid	27.67	21.67
Bra015579.1-P	Field mustard	nucleus	57.86	21.6
AT1G07430.1	Thale cress	nucleus	54.09	19.46
Bra018398.1-P	Field mustard	cytosol	42.14	18.31
Bra002038.1-P	Field mustard	nucleus	42.14	17.63
GSMUA_Achr6P15180_001	Banana	cytosol	40.88	17.57
Zm00001d005609_P001	Maize	cytosol, mitochondrion, nucleus, plastid	38.36	17.43
EER96576	Sorghum	cytosol	38.99	17.37
GSMUA_Achr5P29000_001	Banana	cytosol	40.88	17.02
Bra002594.1-P	Field mustard	plastid	44.03	16.99
TraesCS5A01G183600.1	Wheat	peroxisome	37.11	16.91
Os09t0325700-01	Rice	cytosol	37.74	16.76
VIT_06s0004g05460.t01	Wine grape	nucleus	40.88	16.54
Zm00001d020100_P001	Maize	mitochondrion, nucleus, peroxisome, plastid	37.11	16.48
GSMUA_Achr11P...	Banana	cytosol	40.88	16.46
TraesCS3D01G355900.1	Wheat	plastid	40.88	16.37
Os03t0268600-01	Rice	nucleus	41.51	16.34
TraesCS5B01G182000.1	Wheat	peroxisome	35.85	16.33
TraesCS5D01G188600.1	Wheat	peroxisome	35.85	16.33
Bra034845.1-P	Field mustard	nucleus	40.88	16.29
Os01t0846300-01	Rice	cytosol, mitochondrion, nucleus, plastid	42.14	16.18
TraesCS3A01G362200.1	Wheat	nucleus, plastid	39.62	16.11
Solyc06g076400.2.1	Tomato	nucleus	41.51	16.1
HORVU3Hr1G085930.3	Barley	nucleus, plastid	39.62	16.03
Zm00001d012401_P001	Maize	cytosol, mitochondrion, nucleus, plastid	41.51	15.98
Zm00001d042886_P001	Maize	nucleus	40.88	15.93
EES01744	Sorghum	plastid	40.88	15.78
HORVU4Hr1G060370.1	Barley	nucleus	38.99	15.5
Zm00001d028574_P001	Maize	nucleus	38.36	15.4
TraesCS4B01G210100.1	Wheat	nucleus	38.99	15.27
EER92493	Sorghum	nucleus	38.36	15.21
TraesCS4A01G094300.1	Wheat	nucleus	38.99	15.16
TraesCS4D01G210900.1	Wheat	nucleus	38.99	15.12
TraesCS3B01G394600.3	Wheat	plastid	40.25	14.95
KXG22152	Sorghum	nucleus	40.88	14.01
Bra016595.1-P	Field mustard	cytosol	32.7	12.68
Bra002766.1-P	Field mustard	cytosol	33.33	12.56
Bra019121.1-P	Field mustard	cytosol	32.08	12.35
Bra010441.1-P	Field mustard	cytosol	32.08	12.09
Bra029160.1-P	Field mustard	cytosol	31.45	11.96
Bra013945.1-P	Field mustard	cytosol	31.45	11.76
Bra016034.1-P	Field mustard	cytosol, peroxisome, plastid	31.45	10.33
Bra025964.1-P	Field mustard	cytosol	32.7	10.24
Bra040446.1-P	Field mustard	plasma membrane, vacuole	22.01	3.31
PGSC0003DMT400049695	Potato	extracellular	0.63	0.91

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	EnsemblPlantsGene:Bra030455	EnsemblPlants:Bra030455.1
EnsemblPlants:Bra030455.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932
InterPro:IPR036457	UniProt:M4ENT5	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF518	SUPFAM:SSF81606	UniParc:UPI0002547AD8	SEG:seg

Description

AT1G07430 (E=1e-034) | protein phosphatase 2C, putative / PP2C, putative

Coordinates

chrA05:-:11463714..11465010

Molecular Weight (calculated)

17685.5 Da

IEP (calculated)

4.241

GRAVY (calculated)

-0.777

Length

159 amino acids

Sequence
(BLAST)

001: MDKIQEAGGR VIYWDGRRVL GVLATSRAIG DNYLKPYVSS EPEVTVTERI EEDEFMILAS DGLWDVVTND AACATVQMYL NKKGGRGGGR RREATECEER
101: KEEKAPAADD DDDMDPFGDE TEEEKKAAEE KEGAKDTKKP KVVNLEDLYG TLATTLVNF

Best Arabidopsis Sequence Match ( AT1G07430.1 )
(BLAST)

001: MADICYEDET SACESRPLWS SRKWRIGVQR FRMSPSEMNP TASTTEEEDK SEGIYNKRNK QEEYDFMNCA SSSPSQSSPE EESVSLEDSD VSISDGNSSV
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA

Arabidopsis Description

AIP1Protein phosphatase 2C 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.