Factsheet for Bra016034.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 2
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000052.1-P
Bra000184.1-P
Bra000938.1-P
Bra004967.1-P
Bra005853.1-P
Bra007772.1-P
Bra008064.1-P
Bra009113.1-P
Bra012635.1-P
Bra013262.1-P
Bra017012.1-P
Bra017526.1-P
Bra021032.1-P
Bra021674.1-P
Bra021864.1-P
Bra022817.1-P
Bra024995.1-P
Bra025048.1-P
Bra026299.1-P
Bra028758.1-P
Bra031809.1-P
Bra033267.1-P
Bra037177.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G72770.1	Bra033267.1-P	AT1G01360.1	19407142
AT1G72770.1	Bra033267.1-P	AT1G01360.1	19407143
AT1G72770.1	Bra008064.1-P	AT1G73000.1	19407142
AT1G72770.1	Bra007772.1-P	AT2G26040.1	19407142
AT1G72770.1	Bra021674.1-P	AT2G30880.1	21798944
AT1G72770.1	Bra022817.1-P	AT2G30880.1	21798944
AT1G72770.1	Bra021864.1-P	AT2G33610.1	19033529
AT1G72770.1	Bra000052.1-P	AT2G38310.1	19407142
AT1G72770.1	Bra000052.1-P	AT2G38310.1	19624469
AT1G72770.1	Bra000184.1-P	AT2G40330.1	19407142
AT1G72770.1	Bra004967.1-P	AT2G40330.1	19407142
AT1G72770.1	Bra017012.1-P	AT2G40330.1	19407142
AT1G72770.1	Bra000184.1-P	AT2G40330.1	19624469
AT1G72770.1	Bra004967.1-P	AT2G40330.1	19624469
AT1G72770.1	Bra017012.1-P	AT2G40330.1	19624469
AT1G72770.1	Bra000184.1-P	AT2G40330.1	21847091
AT1G72770.1	Bra004967.1-P	AT2G40330.1	21847091
AT1G72770.1	Bra017012.1-P	AT2G40330.1	21847091
AT1G72770.1	Bra000938.1-P	AT4G01026.1	19407142
AT1G72770.1	Bra012635.1-P	AT4G17870.1	19407142
AT1G72770.1	Bra013262.1-P	AT4G17870.1	19407142
AT1G72770.1	Bra021032.1-P	AT4G17870.1	19407142
AT1G72770.1	Bra012635.1-P	AT4G17870.1	19624469
AT1G72770.1	Bra013262.1-P	AT4G17870.1	19624469
AT1G72770.1	Bra021032.1-P	AT4G17870.1	19624469
AT1G72770.1	Bra012635.1-P	AT4G17870.1	21847091
AT1G72770.1	Bra013262.1-P	AT4G17870.1	21847091
AT1G72770.1	Bra021032.1-P	AT4G17870.1	21847091
AT1G72770.1	Bra026299.1-P	AT4G27920.1	19407142
AT1G72770.1	Bra005853.1-P	AT5G05440.1	19407142
AT1G72770.1	Bra009113.1-P	AT5G05440.1	19407142
AT1G72770.1	Bra028758.1-P	AT5G05440.1	19407142
AT1G72770.1	Bra005853.1-P	AT5G05440.1	19624469
AT1G72770.1	Bra009113.1-P	AT5G05440.1	19624469
AT1G72770.1	Bra028758.1-P	AT5G05440.1	19624469
AT1G72770.1	Bra005853.1-P	AT5G05440.1	21847091
AT1G72770.1	Bra009113.1-P	AT5G05440.1	21847091
AT1G72770.1	Bra028758.1-P	AT5G05440.1	21847091
AT1G72770.1	Bra025048.1-P	AT5G45860.1	19407142
AT1G72770.1	Bra025048.1-P	AT5G45870.1	19407142
AT1G72770.1	Bra017526.1-P	AT5G46790.1	19407142
AT1G72770.1	Bra024995.1-P	AT5G46790.1	19407142
AT1G72770.1	Bra031809.1-P	AT5G66400.1	19033529
AT1G72770.1	Bra037177.1-P	AT5G66400.1	19033529

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96432	Canola	cytosol, peroxisome, plastid	100.0	100.0
CDX72943	Canola	cytosol, peroxisome, plastid	95.66	97.47
AT1G72770.1	Thale cress	cytosol	86.98	82.39
Bra016595.1-P	Field mustard	cytosol	64.46	76.1
Bra025964.1-P	Field mustard	cytosol	74.38	70.87
HORVU7Hr1G029040.1	Barley	cytosol, peroxisome	34.3	56.66
GSMUA_Achr7P24000_001	Banana	cytosol	45.87	56.63
VIT_09s0002g01850.t01	Wine grape	cytosol, peroxisome, plastid	62.19	54.93
Os01t0583100-01	Rice	cytosol	44.83	54.8
HORVU3Hr1G067360.1	Barley	cytosol, peroxisome	5.58	52.94
PGSC0003DMT400006608	Potato	plastid	58.88	52.29
Zm00001d009747_P001	Maize	cytosol	44.63	51.06
TraesCS1D01G449700.1	Wheat	cytosol	43.18	50.98
Zm00001d011202_P002	Maize	cytosol, peroxisome, plastid	46.07	50.91
Bra019121.1-P	Field mustard	cytosol	43.39	50.85
HORVU3Hr1G067380.4	Barley	cytosol	35.33	50.74
TraesCS1A01G441200.1	Wheat	cytosol	43.18	50.73
GSMUA_Achr8P05700_001	Banana	cytosol, peroxisome, plasma membrane	45.04	50.0
Bra002766.1-P	Field mustard	cytosol	43.39	49.76
KXG22422	Sorghum	cytosol, nucleus, plastid	39.05	49.74
Zm00001d039163_P002	Maize	cytosol	44.01	49.65
Zm00001d038846_P001	Maize	cytosol, nucleus	37.81	49.46
KXG22681	Sorghum	cytosol	43.59	49.3
Bra010441.1-P	Field mustard	cytosol	42.98	49.29
TraesCS1A01G358600.1	Wheat	cytosol	38.64	49.21
Bra013945.1-P	Field mustard	cytosol	43.18	49.18
HORVU1Hr1G094840.9	Barley	extracellular, mitochondrion	42.36	49.04
Zm00001d011132_P001	Maize	cytosol, nucleus	15.08	48.99
HORVU1Hr1G080290.6	Barley	cytosol	38.84	48.96
TraesCS3D01G212100.1	Wheat	peroxisome, plasma membrane, vacuole	48.14	48.95
TraesCS3B01G240000.1	Wheat	peroxisome, plasma membrane, vacuole	48.35	48.85
HORVU3Hr1G050340.1	Barley	plasma membrane, vacuole	48.14	48.85
TraesCS1B01G375100.1	Wheat	cytosol	38.43	48.82
EES00964	Sorghum	peroxisome, plasma membrane, vacuole	48.55	48.76
TraesCS3A01G209200.1	Wheat	peroxisome, plasma membrane, vacuole	48.14	48.64
Zm00001d044301_P001	Maize	cytosol, nucleus	48.55	48.55
TraesCS1D01G363500.1	Wheat	cytosol	38.22	48.43
OQU87413	Sorghum	cytosol	38.02	48.04
TraesCS3D01G249000.1	Wheat	cytosol	37.6	48.02
Os05t0592800-02	Rice	endoplasmic reticulum, vacuole	44.01	47.87
TraesCS3A01G249000.1	Wheat	cytosol	37.81	47.41
TraesCS1B01G475700.1	Wheat	cytosol	42.77	46.52
Zm00001d011131_P001	Maize	cytosol	25.62	43.97
Os05t0537400-00	Rice	cytosol	26.86	43.92
TraesCS3B01G277900.1	Wheat	cytosol	37.81	43.88
GSMUA_Achr3P26270_001	Banana	cytosol, peroxisome, plastid	44.83	43.75
Bra018398.1-P	Field mustard	cytosol	29.34	38.8
Solyc08g062650.2.1	Tomato	extracellular	37.4	38.59
Bra002038.1-P	Field mustard	nucleus	29.96	38.16
Bra034845.1-P	Field mustard	nucleus	30.58	37.09
TraesCS7A01G047900.1	Wheat	cytosol, mitochondrion, peroxisome	8.47	36.94
Bra002594.1-P	Field mustard	plastid	30.37	35.68
Bra015579.1-P	Field mustard	nucleus	29.13	33.1
Bra029160.1-P	Field mustard	cytosol	27.89	32.3
Bra030455.1-P	Field mustard	cytosol	10.33	31.45
Bra031574.1-P	Field mustard	nucleus	28.31	31.42
Bra040446.1-P	Field mustard	plasma membrane, vacuole	18.59	8.5

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:11.1.2.1.1.2	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	EnsemblPlantsGene:Bra016034
EnsemblPlants:Bra016034.1	EnsemblPlants:Bra016034.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722
GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457
UniProt:M4DHQ7	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF374	SMART:SM00332	SUPFAM:SSF81606
UniParc:UPI0002541C4F	SEG:seg	:	:	:	:

Description

AT1G72770 (E=6e-204) HAB1 | HAB1 (HOMOLOGY TO ABI1); catalytic/ protein serine/threonine phosphatase

Coordinates

chrA07:+:19744464..19746197

Molecular Weight (calculated)

52618.7 Da

IEP (calculated)

4.598

GRAVY (calculated)

-0.149

Length

484 amino acids

Sequence
(BLAST)

001: MEEMTPAVAV TLSLANSICD SSPVDITQLK NVTDAADLLP DSTMEEEPKK GSCDGSVVDE DEVEDTSAVI SEGLLVVDAG SELTLSMEID NGRVLAKAII
101: LGESSIEEVP TAKVLIQDTK IEDCSGVTAS EVVIRLPEEN SNNHVAKGRS VYELDCIPLW GTVSIQGNRS EMEDAVAVLP HFLKLPIKML MGDHEGMSPS
201: LTHLTGHFFG VYDGHGGYQV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWEKVF TSCFLNVDGE IEGRIGRAAA VVGGSSDVVL EAVASETVGS
301: TAVVALVCSS HLVVSNCGDS RAVLYRGKEA MPLSVDHKPD REDEYARIEN AGGKVIQWQG ARVFGVLAMS RSLGDRYLKP YVIPEPEVTF MPRSREDDCL
401: IIASDGLWDV MSNQEVCEVA RKRILMWHKK HGAPPLAERG KGTDPACQAA AEYLSVLALQ KGSKDNISII VVDLKAQRKF KTRA

Best Arabidopsis Sequence Match ( AT1G72770.3 )
(BLAST)

001: MEEMTPAVAM TLSLAANTMC ESSPVEITQL KNVTDAADLL SDSENQSFCN GGTECTMEDV SELEEVGEQD LLKTLSDTRS GSSNVFDEDD VLSVVEDNSA
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GDRYLKPYVI PEPEVTFMPR SREDECLILA SDGLWDVMNN QEVCEIARRR ILMWHKKNGA PPLAERGKGI DPACQAAADY LSMLALQKGS KDNISIIVID
501: LKAQRKFKTR T

Arabidopsis Description

HAB1Protein phosphatase 2C 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.