Factsheet for Bra004967.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra016034.1-P
Bra039034.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G40330.1	Bra016034.1-P	AT1G72770.1	19407142
AT2G40330.1	Bra016034.1-P	AT1G72770.1	19624469
AT2G40330.1	Bra039034.1-P	AT2G20000.1	17944809

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74796	Canola	cytosol, nucleus, plastid	98.58	98.58
CDY18867	Canola	cytosol, mitochondrion, nucleus, plastid	96.7	96.7
Bra017012.1-P	Field mustard	cytosol	84.43	87.32
AT2G40330.1	Thale cress	cytosol	86.32	85.12
Bra000184.1-P	Field mustard	cytosol, mitochondrion	81.6	81.6
Bra028758.1-P	Field mustard	cytosol	45.75	58.79
PGSC0003DMT400053120	Potato	cytosol, plastid	55.19	58.21
PGSC0003DMT400053119	Potato	cytosol, plastid	55.19	58.21
PGSC0003DMT400053102	Potato	cytosol, plastid	55.19	58.21
Solyc03g095780.1.1	Tomato	plastid	54.72	57.71
Solyc05g052420.1.1	Tomato	cytosol	22.17	57.32
TraesCS4A01G114400.1	Wheat	cytosol	47.64	56.42
Bra017125.1-P	Field mustard	plastid	53.77	55.88
KRH73249	Soybean	plastid	54.72	55.77
Bra000052.1-P	Field mustard	plastid	54.25	55.56
TraesCS1B01G306800.1	Wheat	mitochondrion	50.47	55.15
HORVU1Hr1G070420.1	Barley	mitochondrion	50.94	53.73
TraesCS1A01G297600.1	Wheat	mitochondrion	50.94	53.73
Bra005115.1-P	Field mustard	plastid	37.74	53.69
PGSC0003DMT400069734	Potato	mitochondrion, plastid	52.36	53.37
TraesCS1D01G293600.1	Wheat	mitochondrion, plastid	50.47	53.23
Zm00001d038436_P001	Maize	plastid	50.0	53.0
Bra025048.1-P	Field mustard	cytosol	41.98	52.35
PGSC0003DMT400061535	Potato	plastid	53.77	52.29
KRH14908	Soybean	plastid	53.77	52.29
TraesCS3B01G380300.1	Wheat	mitochondrion, plastid	50.94	52.17
TraesCS3A01G348400.1	Wheat	plastid	50.0	51.46
GSMUA_Achr6P32790_001	Banana	cytosol	50.94	51.18
Zm00001d043014_P001	Maize	cytosol	51.42	51.17
GSMUA_Achr9P04600_001	Banana	cytosol	34.43	51.05
HORVU3Hr1G088100.1	Barley	plastid	49.53	50.97
HORVU3Hr1G039010.1	Barley	plastid	49.53	50.97
TraesCS3D01G342000.1	Wheat	plastid	49.53	50.97
Bra005853.1-P	Field mustard	cytosol	48.58	50.74
Os05t0473000-01	Rice	cytosol	51.89	50.69
TraesCS2D01G087500.1	Wheat	plastid	50.0	49.53
Bra009113.1-P	Field mustard	cytosol	47.64	49.51
TraesCS2B01G105300.1	Wheat	plastid	50.47	49.31
EES19683	Sorghum	plastid	50.0	49.07
GSMUA_AchrUn_...	Banana	plastid	36.32	48.73
GSMUA_Achr9P17980_001	Banana	cytosol	33.96	48.32
TraesCS4D01G191200.1	Wheat	cytosol	50.47	47.77
TraesCS4B01G189800.1	Wheat	cytosol	50.47	47.77
Bra013334.1-P	Field mustard	cytosol	37.26	47.59
GSMUA_Achr5P29490_001	Banana	plastid	36.32	47.53
HORVU4Hr1G055220.1	Barley	cytosol	50.0	47.32
EER92405	Sorghum	plastid	49.53	47.3
Zm00001d047705_P001	Maize	plastid	48.58	47.25
GSMUA_Achr11P...	Banana	cytosol, plastid	34.43	46.2
Zm00001d028793_P001	Maize	cytosol, mitochondrion, plastid	47.64	45.91
Os03t0297600-01	Rice	cytosol	49.53	45.85
Bra007772.1-P	Field mustard	cytosol	40.09	45.21
KRH31193	Soybean	cytosol, golgi, plastid	53.3	43.97
Os01t0827800-00	Rice	plastid	52.83	43.75
Bra033267.1-P	Field mustard	cytosol	37.74	43.01
GSMUA_Achr8P21220_001	Banana	cytosol	34.43	42.94
Bra026299.1-P	Field mustard	cytosol	37.26	42.93
Bra003463.1-P	Field mustard	cytosol	37.74	42.78
Solyc06g050500.2.1	Tomato	plastid	54.25	41.82
Bra012635.1-P	Field mustard	cytosol	37.26	41.36
Bra003077.1-P	Field mustard	cytosol	35.38	40.76
Bra029093.1-P	Field mustard	cytosol	35.38	40.76
Bra013262.1-P	Field mustard	cytosol	36.32	40.31
Bra000938.1-P	Field mustard	cytosol	35.85	39.38
Bra022634.1-P	Field mustard	cytosol	34.91	39.36
Bra008064.1-P	Field mustard	plastid	37.26	38.54
Bra017526.1-P	Field mustard	nucleus	33.02	38.25
OQU87775	Sorghum	endoplasmic reticulum, extracellular	49.06	38.24
GSMUA_Achr10P...	Banana	cytosol, plastid	35.38	37.88
Bra024995.1-P	Field mustard	nucleus	37.26	37.62
TraesCS2A01G089400.1	Wheat	plastid	50.0	37.06
Bra021032.1-P	Field mustard	cytosol	25.94	35.03
Zm00001d012475_P001	Maize	cytosol	50.0	33.97

Protein Annotations

EnsemblPlants:Bra004967.1	EnsemblPlants:Bra004967.1-P	EnsemblPlantsGene:Bra004967	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase
InterPro:START-like_dom_sf	PANTHER:PTHR31213	PANTHER:PTHR31213:SF3	PFAM:PF10604	SEG:seg	SUPFAM:SSF55961
UniParc:UPI00025480E9	UniProt:M4CL81	MapMan:11.1.2.1.1.1	:	:	:

Description

AT2G40330 (E=7e-085) | Bet v I allergen family protein

Coordinates

chrA05:+:2688167..2688805

Molecular Weight (calculated)

23447.5 Da

IEP (calculated)

7.069

GRAVY (calculated)

-0.319

Length

212 amino acids

Sequence
(BLAST)

001: MPTSLQFQRS SSAAETSNAT VSSYHHHHKQ IHKVSLTRGM ADVPEHVEIF HTHVVSPSQC FSVVVQDVDA SASAVWSILS RFEHPQAYKH FVKSCHVAVG
101: DGREVGSVRE VRVVSGLPAA FSLERLEIMD DDRHVISFSV VGGDHRLQNY RSVTTVHECS STEDGKKRAR VVESYVVDVP AGNDKEETCS FADTIVRCNL
201: HSLAKLAENK PK

Best Arabidopsis Sequence Match ( AT2G40330.1 )
(BLAST)

001: MPTSIQFQRS STAAEAANAT VRNYPHHHQK QVQKVSLTRG MADVPEHVEL SHTHVVGPSQ CFSVVVQDVE APVSTVWSIL SRFEHPQAYK HFVKSCHVVI
101: GDGREVGSVR EVRVVSGLPA AFSLERLEIM DDDRHVISFS VVGGDHRLMN YKSVTTVHES EEDSDGKKRT RVVESYVVDV PAGNDKEETC SFADTIVRCN
201: LQSLAKLAEN TSKFS

Arabidopsis Description

PYL6Abscisic acid receptor PYL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8E3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.