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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 2
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU1Hr1G080290.6
HORVU1Hr1G094840.9
HORVU3Hr1G050340.1
HORVU3Hr1G067360.1
HORVU3Hr1G067380.4
HORVU3Hr1G085930.3
HORVU4Hr1G060370.1
HORVU7Hr1G029040.1
HORVU7Hr1G079650.7
HORVU7Hr1G093620.9

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G38310.1 HORVU1Hr1G080290.6 AT1G72770.1 19407142
AT2G38310.1 HORVU1Hr1G094840.9 AT1G72770.1 19407142
AT2G38310.1 HORVU3Hr1G050340.1 AT1G72770.1 19407142
AT2G38310.1 HORVU3Hr1G067360.1 AT1G72770.1 19407142
AT2G38310.1 HORVU3Hr1G067380.4 AT1G72770.1 19407142
AT2G38310.1 HORVU7Hr1G029040.1 AT1G72770.1 19407142
AT2G38310.1 HORVU1Hr1G080290.6 AT1G72770.1 19624469
AT2G38310.1 HORVU1Hr1G094840.9 AT1G72770.1 19624469
AT2G38310.1 HORVU3Hr1G050340.1 AT1G72770.1 19624469
AT2G38310.1 HORVU3Hr1G067360.1 AT1G72770.1 19624469
AT2G38310.1 HORVU3Hr1G067380.4 AT1G72770.1 19624469
AT2G38310.1 HORVU7Hr1G029040.1 AT1G72770.1 19624469
AT2G38310.1 HORVU3Hr1G085930.3 AT3G11410.1 19407142
AT2G38310.1 HORVU4Hr1G060370.1 AT3G11410.1 19407142
AT2G38310.1 HORVU7Hr1G079650.7 AT4G18340.1 19407142
AT2G38310.1 HORVU3Hr1G085930.3 AT5G59220.1 19407142
AT2G38310.1 HORVU4Hr1G060370.1 AT5G59220.1 19407142
AT2G40330.1 HORVU1Hr1G080290.6 AT1G72770.1 19407142
AT2G40330.1 HORVU1Hr1G094840.9 AT1G72770.1 19407142
AT2G40330.1 HORVU3Hr1G050340.1 AT1G72770.1 19407142
AT2G40330.1 HORVU3Hr1G067360.1 AT1G72770.1 19407142
AT2G40330.1 HORVU3Hr1G067380.4 AT1G72770.1 19407142
AT2G40330.1 HORVU7Hr1G029040.1 AT1G72770.1 19407142
AT2G40330.1 HORVU1Hr1G080290.6 AT1G72770.1 19624469
AT2G40330.1 HORVU1Hr1G094840.9 AT1G72770.1 19624469
AT2G40330.1 HORVU3Hr1G050340.1 AT1G72770.1 19624469
AT2G40330.1 HORVU3Hr1G067360.1 AT1G72770.1 19624469
AT2G40330.1 HORVU3Hr1G067380.4 AT1G72770.1 19624469
AT2G40330.1 HORVU7Hr1G029040.1 AT1G72770.1 19624469
AT2G40330.1 HORVU7Hr1G093620.9 AT2G20000.1 17944809
AT5G05440.1 HORVU1Hr1G080290.6 AT1G72770.1 19407142
AT5G05440.1 HORVU1Hr1G094840.9 AT1G72770.1 19407142
AT5G05440.1 HORVU3Hr1G050340.1 AT1G72770.1 19407142
AT5G05440.1 HORVU3Hr1G067360.1 AT1G72770.1 19407142
AT5G05440.1 HORVU3Hr1G067380.4 AT1G72770.1 19407142
AT5G05440.1 HORVU7Hr1G029040.1 AT1G72770.1 19407142
AT5G05440.1 HORVU1Hr1G080290.6 AT1G72770.1 19624469
AT5G05440.1 HORVU1Hr1G094840.9 AT1G72770.1 19624469
AT5G05440.1 HORVU3Hr1G050340.1 AT1G72770.1 19624469
AT5G05440.1 HORVU3Hr1G067360.1 AT1G72770.1 19624469
AT5G05440.1 HORVU3Hr1G067380.4 AT1G72770.1 19624469
AT5G05440.1 HORVU7Hr1G029040.1 AT1G72770.1 19624469
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G191200.1 Wheat cytosol 97.77 97.77
TraesCS4B01G189800.1 Wheat cytosol 97.77 97.77
TraesCS4A01G114400.1 Wheat cytosol 78.12 97.77
Os03t0297600-01 Rice cytosol 87.5 85.59
Zm00001d028793_P001 Maize cytosol, mitochondrion, plastid 82.14 83.64
EER92405 Sorghum plastid 81.7 82.43
Zm00001d047705_P001 Maize plastid 79.02 81.19
HORVU1Hr1G070420.1 Barley mitochondrion 61.61 68.66
GSMUA_Achr9P17980_001 Banana cytosol 45.09 67.79
GSMUA_Achr9P04600_001 Banana cytosol 42.86 67.13
HORVU3Hr1G088100.1 Barley plastid 61.61 66.99
HORVU3Hr1G039010.1 Barley plastid 61.61 66.99
GSMUA_AchrUn_... Banana plastid 46.88 66.46
KRH00319 Soybean cytosol 51.34 64.97
GSMUA_Achr6P32790_001 Banana cytosol 60.27 63.98
KRH49452 Soybean plastid 50.45 63.48
Bra028758.1-P Field mustard cytosol 45.09 61.21
GSMUA_Achr8P21220_001 Banana cytosol 46.43 61.18
VIT_13s0067g01940.t01 Wine grape plastid 55.8 58.96
KRH76014 Soybean cytosol 55.36 57.41
Bra017125.1-P Field mustard plastid 52.23 57.35
CDY18391 Canola plastid 52.23 57.35
CDY54415 Canola cytosol 52.23 57.35
CDX91449 Canola plastid 52.68 57.0
Solyc03g095780.1.1 Tomato plastid 50.45 56.22
AT2G38310.1 Thale cress plastid 51.79 56.04
CDY54453 Canola plastid 51.79 55.77
KRH73249 Soybean plastid 51.79 55.77
PGSC0003DMT400053120 Potato cytosol, plastid 50.0 55.72
PGSC0003DMT400053119 Potato cytosol, plastid 50.0 55.72
PGSC0003DMT400053102 Potato cytosol, plastid 50.0 55.72
CDX93191 Canola cytosol 50.45 55.66
Solyc10g076410.1.1 Tomato plastid 50.45 55.66
Bra000052.1-P Field mustard plastid 51.34 55.56
CDY14471 Canola plastid 51.34 55.56
CDY07739 Canola plastid 51.34 55.56
VIT_08s0058g00470.t01 Wine grape plastid 56.25 55.51
Bra017012.1-P Field mustard cytosol 50.45 55.12
CDY52923 Canola cytosol 50.45 55.12
PGSC0003DMT400041080 Potato mitochondrion 50.89 55.07
Solyc05g052420.1.1 Tomato cytosol 20.09 54.88
GSMUA_Achr10P... Banana cytosol, plastid 48.21 54.55
Solyc10g085310.1.1 Tomato plastid 51.79 54.46
Bra005115.1-P Field mustard plastid 36.16 54.36
CDY04951 Canola cytosol 47.32 53.81
PGSC0003DMT400028658 Potato nucleus 50.89 53.52
Solyc09g015380.1.1 Tomato plastid 47.77 53.23
PGSC0003DMT400061535 Potato plastid 51.79 53.21
KRH14908 Soybean plastid 51.34 52.75
AT5G05440.1 Thale cress cytosol 47.77 52.71
HORVU3Hr1G030210.5 Barley plastid 27.23 52.59
CDX98844 Canola cytosol 47.77 52.45
Bra009113.1-P Field mustard cytosol 47.77 52.45
CDX70150 Canola cytosol 47.77 52.45
HORVU4Hr1G060110.1 Barley mitochondrion 22.77 52.04
HORVU7Hr1G088140.2 Barley cytosol 45.54 52.04
CDY24911 Canola cytosol, mitochondrion 49.11 51.64
AT2G40330.1 Thale cress cytosol 49.55 51.63
PGSC0003DMT400069734 Potato mitochondrion, plastid 47.77 51.44
PGSC0003DMT400075056 Potato plastid 49.11 51.4
CDX74796 Canola cytosol, nucleus, plastid 48.21 50.94
CDY07608 Canola cytosol, mitochondrion 48.21 50.94
Bra000184.1-P Field mustard cytosol, mitochondrion 48.21 50.94
CDX80959 Canola cytosol 45.54 50.25
Bra005853.1-P Field mustard cytosol 45.54 50.25
CDY72318 Canola cytosol 45.54 50.25
HORVU4Hr1G060100.1 Barley mitochondrion 21.88 50.0
Bra004967.1-P Field mustard mitochondrion 47.32 50.0
CDY18867 Canola cytosol, mitochondrion, nucleus, plastid 46.88 49.53
HORVU3Hr1G040680.1 Barley plastid 24.11 46.96
HORVU0Hr1G032390.2 Barley cytosol, extracellular 16.96 44.19
KRH31193 Soybean cytosol, golgi, plastid 50.0 43.58
Solyc06g050500.2.1 Tomato plastid 53.12 43.27
HORVU7Hr1G079270.1 Barley cytosol 33.48 38.07
HORVU1Hr1G050110.1 Barley plastid 42.86 35.04
HORVU3Hr1G054230.1 Barley mitochondrion 23.21 32.7
HORVU1Hr1G030390.2 Barley extracellular, mitochondrion, plasma membrane 39.73 30.58
HORVU3Hr1G107030.1 Barley mitochondrion 28.12 21.8
Protein Annotations
EnsemblPlants:HORVU4Hr1G055220.1EnsemblPlantsGene:HORVU4Hr1G055220Gene3D:3.30.530.20InterPro:IPR023393InterPro:Polyketide_cyclase/dehydrataseInterPro:START-like_dom_sf
PANTHER:PTHR31213PANTHER:PTHR31213:SF3PFAM:PF10604SEG:segSUPFAM:SSF55961UniParc:UPI0002969B0B
UniProt:M0YP57MapMan:11.1.2.1.1.1::::
Description
No Description!
Coordinates
chrchr4H:+:463075858..463077315
Molecular Weight (calculated)
23386.8 Da
IEP (calculated)
6.872
GRAVY (calculated)
0.082
Length
224 amino acids
Sequence
(BLAST)
001: MPCIPASSPS IQHHNHHHRV LAGVGVGVGM GCGAEAVVAA AGTAGMRCGE HDCEVPAEVA RHHEHAEPGS GQCCSAVVQH VAAPAAAVWS VVRRFDQPQA
101: YKRFVRSCAL VAGDGGVGTL REVHVVSGLP AASSRERLEI LDDESHVLSF RVVGGEHRLK NYLSVTTVHP SPAAPSSATV VVESYVVDVP AGNTIDDTRV
201: FIDTIVKCNL QSLAKTAEKL AAVS
Best Arabidopsis Sequence Match ( AT2G38310.1 )
(BLAST)
001: MLAVHRPSSA VSDGDSVQIP MMIASFQKRF PSLSRDSTAA RFHTHEVGPN QCCSAVIQEI SAPISTVWSV VRRFDNPQAY KHFLKSCSVI GGDGDNVGSL
101: RQVHVVSGLP AASSTERLDI LDDERHVISF SVVGGDHRLS NYRSVTTLHP SPISGTVVVE SYVVDVPPGN TKEETCDFVD VIVRCNLQSL AKIAENTAAE
201: SKKKMSL
Arabidopsis Description
PYL4Abscisic acid receptor PYL4 [Source:UniProtKB/Swiss-Prot;Acc:O80920]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.