Factsheet for HORVU1Hr1G030390.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, extracellular

Predictor Summary:

plastid 1
extracellular 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion, plasma membrane
Any Predictor:	extracellular, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	extracellular
TargetP:	mitochondrion
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G080290.6
HORVU1Hr1G094840.9
HORVU3Hr1G050340.1
HORVU3Hr1G067360.1
HORVU3Hr1G067380.4
HORVU7Hr1G029040.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01360.1	HORVU1Hr1G080290.6	AT1G72770.1	19407142
AT1G01360.1	HORVU1Hr1G094840.9	AT1G72770.1	19407142
AT1G01360.1	HORVU3Hr1G050340.1	AT1G72770.1	19407142
AT1G01360.1	HORVU3Hr1G067360.1	AT1G72770.1	19407142
AT1G01360.1	HORVU3Hr1G067380.4	AT1G72770.1	19407142
AT1G01360.1	HORVU7Hr1G029040.1	AT1G72770.1	19407142
AT1G01360.1	HORVU1Hr1G080290.6	AT1G72770.1	19407143
AT1G01360.1	HORVU1Hr1G094840.9	AT1G72770.1	19407143
AT1G01360.1	HORVU3Hr1G050340.1	AT1G72770.1	19407143
AT1G01360.1	HORVU3Hr1G067360.1	AT1G72770.1	19407143
AT1G01360.1	HORVU3Hr1G067380.4	AT1G72770.1	19407143
AT1G01360.1	HORVU7Hr1G029040.1	AT1G72770.1	19407143
AT4G01026.1	HORVU1Hr1G080290.6	AT1G72770.1	19407142
AT4G01026.1	HORVU1Hr1G094840.9	AT1G72770.1	19407142
AT4G01026.1	HORVU3Hr1G050340.1	AT1G72770.1	19407142
AT4G01026.1	HORVU3Hr1G067360.1	AT1G72770.1	19407142
AT4G01026.1	HORVU3Hr1G067380.4	AT1G72770.1	19407142
AT4G01026.1	HORVU7Hr1G029040.1	AT1G72770.1	19407142
AT4G27920.1	HORVU1Hr1G080290.6	AT1G72770.1	19407142
AT4G27920.1	HORVU1Hr1G094840.9	AT1G72770.1	19407142
AT4G27920.1	HORVU3Hr1G050340.1	AT1G72770.1	19407142
AT4G27920.1	HORVU3Hr1G067360.1	AT1G72770.1	19407142
AT4G27920.1	HORVU3Hr1G067380.4	AT1G72770.1	19407142
AT4G27920.1	HORVU7Hr1G029040.1	AT1G72770.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G126800.1	Wheat	cytosol	69.07	98.05
TraesCS1D01G126900.1	Wheat	cytosol	68.73	97.56
TraesCS1B01G145800.1	Wheat	cytosol	68.38	97.07
HORVU0Hr1G032390.2	Barley	cytosol, extracellular	26.8	90.7
Os05t0213500-01	Rice	cytosol, nucleus	63.23	88.04
EES17886	Sorghum	cytosol	55.67	82.23
Zm00001d037719_P001	Maize	cytosol	55.67	82.23
Zm00001d010445_P001	Maize	cytosol	54.98	81.22
KRH47929	Soybean	cytosol	49.14	77.3
PGSC0003DMT400012888	Potato	cytosol	46.39	76.27
VIT_02s0025g01340.t01	Wine grape	cytosol	48.11	75.68
VIT_16s0050g02620.t01	Wine grape	cytosol	47.77	75.14
Solyc08g082180.2.1	Tomato	cytosol	48.8	75.13
PGSC0003DMT400031686	Potato	cytosol	48.45	74.6
Zm00001d002533_P001	Maize	cytosol	32.3	74.6
Solyc12g055990.1.1	Tomato	cytosol	46.39	74.59
Solyc03g007310.2.1	Tomato	cytosol	47.08	74.05
GSMUA_Achr4P08490_001	Banana	cytosol	50.17	73.37
PGSC0003DMT400023511	Potato	cytosol	46.39	72.97
KRH18155	Soybean	cytosol	47.77	72.77
GSMUA_Achr10P...	Banana	cytosol	46.39	72.58
KRH65845	Soybean	cytosol	47.77	72.02
AT1G01360.1	Thale cress	cytosol	46.05	71.66
GSMUA_Achr10P...	Banana	cytosol	45.7	71.51
GSMUA_AchrUn_...	Banana	cytosol	45.7	71.51
CDY15183	Canola	cytosol	45.7	71.12
Bra033267.1-P	Field mustard	cytosol	45.36	70.97
CDX90028	Canola	cytosol	45.36	70.21
CDY64350	Canola	cytosol	43.99	69.95
PGSC0003DMT400000606	Potato	cytosol	44.67	69.89
CDY04688	Canola	cytosol	44.67	69.89
GSMUA_Achr2P19970_001	Banana	cytosol	44.67	69.89
VIT_15s0046g01050.t01	Wine grape	cytosol	45.7	69.27
CDY49462	Canola	cytosol	43.64	69.02
Bra003077.1-P	Field mustard	cytosol	43.64	69.02
Solyc01g095700.2.1	Tomato	cytosol	43.99	68.82
CDX96197	Canola	cytosol	44.33	68.62
Bra029093.1-P	Field mustard	cytosol	43.3	68.48
CDY38728	Canola	cytosol	43.3	68.48
AT5G53160.2	Thale cress	cytosol, nucleus, peroxisome	43.99	68.09
GSMUA_Achr3P03480_001	Banana	cytosol	48.11	67.96
CDY61488	Canola	cytosol	42.96	67.93
Bra022634.1-P	Field mustard	cytosol	43.64	67.55
KRH53449	Soybean	cytosol	44.33	67.54
CDY27022	Canola	cytosol	43.3	67.02
CDY25052	Canola	cytosol	42.96	66.84
CDX91871	Canola	cytosol	44.33	66.84
CDX74368	Canola	cytosol	44.33	66.84
Bra000938.1-P	Field mustard	cytosol	44.33	66.84
CDY53905	Canola	cytosol	42.61	66.31
GSMUA_Achr4P15670_001	Banana	cytosol	42.61	66.31
Bra003463.1-P	Field mustard	cytosol	42.61	66.31
CDY07165	Canola	cytosol	13.4	65.0
GSMUA_Achr8P19910_001	Banana	mitochondrion	45.7	63.64
AT4G27920.1	Thale cress	cytosol	39.52	62.84
KRH06494	Soybean	cytosol, extracellular, vacuole	41.24	62.83
Bra026299.1-P	Field mustard	cytosol	39.52	62.5
CDX89219	Canola	cytosol	39.52	62.16
CDY70517	Canola	cytosol	39.18	61.62
GSMUA_Achr2P15420_001	Banana	cytosol, mitochondrion, nucleus, plastid	47.77	60.96
AT4G01026.1	Thale cress	cytosol	43.3	59.72
KRH65286	Soybean	cytosol	16.84	53.85
KRH16733	Soybean	cytosol	19.24	53.33
HORVU7Hr1G079270.1	Barley	cytosol	35.05	51.78
HORVU3Hr1G054230.1	Barley	mitochondrion	27.49	50.31
HORVU4Hr1G060110.1	Barley	mitochondrion	15.81	46.94
HORVU3Hr1G088100.1	Barley	plastid	30.58	43.2
HORVU3Hr1G039010.1	Barley	plastid	30.58	43.2
HORVU3Hr1G030210.5	Barley	plastid	17.18	43.1
HORVU7Hr1G088140.2	Barley	cytosol	28.87	42.86
HORVU4Hr1G060100.1	Barley	mitochondrion	14.43	42.86
HORVU1Hr1G070420.1	Barley	mitochondrion	29.55	42.79
HORVU4Hr1G055220.1	Barley	cytosol	30.58	39.73
HORVU3Hr1G040680.1	Barley	plastid	15.46	39.13
HORVU1Hr1G050110.1	Barley	plastid	27.49	29.2
HORVU3Hr1G107030.1	Barley	mitochondrion	18.21	18.34

Protein Annotations

EnsemblPlants:HORVU1Hr1G030390.2	EnsemblPlantsGene:HORVU1Hr1G030390	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase	InterPro:START-like_dom_sf
PANTHER:PTHR31213	PANTHER:PTHR31213:SF4	PFAM:PF10604	SEG:seg	SUPFAM:SSF55961	UniParc:UPI000B45FC52
UniProt:A0A287F1N7	MapMan:11.1.2.1.1.1	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:174189432..174192319

Molecular Weight (calculated)

31457.7 Da

IEP (calculated)

9.114

GRAVY (calculated)

-0.289

Length

291 amino acids

Sequence
(BLAST)

001: RSLPVFPALG VCAWITRGWA RLSLHPADFC TRPCKEPTKP ISPTQPFPKQ QQRRRKRKPA AEEGRPGQPP VGVAAAAVAA GIRVAGMVGL VGGGARVWRL
101: SHEPASGAGG GGAATEADYM RRLHGHAPGE NQCTSALVKH IKAPVHLVWS LVRSFDQPQR YKPFVSRCVV RGGDLEIGSV REVNVKTGLP ATTSTERLEQ
201: LDDDEHILSV KFVGGDHRLR NYSSIITVHP QSIDGRPGTL VIESFVVDVP DGNTKDETCY FVEAVIKCNL TSLAEVSERL AVQSPTSPLE Q

Best Arabidopsis Sequence Match ( AT5G53160.2 )
(BLAST)

001: MEANGIENLT NPNQEREFIR RHHKHELVDN QCSSTLVKHI NAPVHIVWSL VRRFDQPQKY KPFISRCVVK GNMEIGTVRE VDVKSGLPAT RSTERLELLD
101: DNEHILSIRI VGGDHRLKNY SSIISLHPET IEGRIGTLVI ESFVVDVPEG NTKDETCYFV EALIKCNLKS LADISERLAV QDTTESRV

Arabidopsis Description

PYL8RCAR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UJN3]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.