Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc07g040990.2.1 | |
| Solyc08g062650.2.1 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400031686 | Potato | cytosol | 98.94 | 98.94 |
| Solyc12g055990.1.1 | Tomato | cytosol | 84.13 | 87.85 |
| VIT_02s0025g01340.t01 | Wine grape | cytosol | 84.13 | 85.95 |
| KRH47929 | Soybean | cytosol | 78.84 | 80.54 |
| Solyc03g007310.2.1 | Tomato | cytosol | 77.78 | 79.46 |
| GSMUA_Achr10P... | Banana | cytosol | 73.55 | 74.73 |
| AT1G01360.1 | Thale cress | cytosol | 73.02 | 73.8 |
| CDY04688 | Canola | cytosol | 72.49 | 73.66 |
| HORVU0Hr1G032390.2 | Barley | cytosol, extracellular | 33.33 | 73.26 |
| GSMUA_Achr10P... | Banana | cytosol | 71.96 | 73.12 |
| Bra033267.1-P | Field mustard | cytosol | 71.96 | 73.12 |
| CDY15183 | Canola | cytosol | 71.96 | 72.73 |
| GSMUA_Achr2P19970_001 | Banana | cytosol | 71.43 | 72.58 |
| CDX90028 | Canola | cytosol | 71.96 | 72.34 |
| Solyc01g095700.2.1 | Tomato | cytosol | 70.37 | 71.51 |
| GSMUA_AchrUn_... | Banana | cytosol | 69.31 | 70.43 |
| CDY25052 | Canola | cytosol | 69.31 | 70.05 |
| TraesCS1B01G145800.1 | Wheat | cytosol | 75.66 | 69.76 |
| CDY53905 | Canola | cytosol | 68.78 | 69.52 |
| Bra003463.1-P | Field mustard | cytosol | 68.78 | 69.52 |
| CDX74368 | Canola | cytosol | 70.9 | 69.43 |
| TraesCS1A01G126800.1 | Wheat | cytosol | 75.13 | 69.27 |
| TraesCS1D01G126900.1 | Wheat | cytosol | 75.13 | 69.27 |
| EES17886 | Sorghum | cytosol | 71.96 | 69.04 |
| Bra000938.1-P | Field mustard | cytosol | 70.37 | 68.91 |
| Zm00001d037719_P001 | Maize | cytosol | 71.43 | 68.53 |
| Os02t0255500-01 | Rice | cytosol | 73.55 | 68.14 |
| Zm00001d010445_P001 | Maize | cytosol | 70.9 | 68.02 |
| Os05t0213500-01 | Rice | cytosol, nucleus | 75.13 | 67.94 |
| CDX91871 | Canola | cytosol | 69.31 | 67.88 |
| KRH06494 | Soybean | cytosol, extracellular, vacuole | 68.25 | 67.54 |
| GSMUA_Achr3P03480_001 | Banana | cytosol | 73.02 | 66.99 |
| EES04864 | Sorghum | cytosol | 73.55 | 65.88 |
| Zm00001d016105_P001 | Maize | cytosol | 73.02 | 65.09 |
| CDY07165 | Canola | cytosol | 20.63 | 65.0 |
| GSMUA_Achr8P19910_001 | Banana | mitochondrion | 70.37 | 63.64 |
| Zm00001d053396_P001 | Maize | cytosol | 71.43 | 62.21 |
| Zm00001d002533_P001 | Maize | cytosol | 41.27 | 61.9 |
| AT4G01026.1 | Thale cress | cytosol | 68.25 | 61.14 |
| GSMUA_Achr2P15420_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 71.96 | 59.65 |
| Os02t0255300-00 | Rice | cytosol, plastid | 54.5 | 57.22 |
| Os06t0527800-01 | Rice | cytosol | 59.26 | 54.37 |
| Os06t0528300-00 | Rice | cytosol | 58.73 | 53.88 |
| Os06t0526400-00 | Rice | cytosol | 53.44 | 51.53 |
| TraesCS7B01G232100.1 | Wheat | cytoskeleton, cytosol, nucleus | 52.91 | 51.28 |
| HORVU7Hr1G079270.1 | Barley | cytosol | 53.44 | 51.27 |
| TraesCS7D01G328000.1 | Wheat | cytosol | 52.91 | 50.76 |
| TraesCS7A01G350800.1 | Wheat | cytosol | 51.32 | 49.24 |
| HORVU1Hr1G030390.2 | Barley | extracellular, mitochondrion, plasma membrane | 75.13 | 48.8 |
| Solyc05g052420.1.1 | Tomato | cytosol | 20.63 | 47.56 |
| Solyc08g065410.1.1 | Tomato | cytosol | 35.98 | 46.58 |
| HORVU3Hr1G054230.1 | Barley | mitochondrion | 38.62 | 45.91 |
| Solyc03g095780.1.1 | Tomato | plastid | 48.68 | 45.77 |
| Solyc09g015380.1.1 | Tomato | plastid | 44.44 | 41.79 |
| Solyc10g076410.1.1 | Tomato | plastid | 44.44 | 41.38 |
| Solyc10g085310.1.1 | Tomato | plastid | 44.97 | 39.91 |
| Solyc12g095970.1.1 | Tomato | cytosol | 39.15 | 38.95 |
| Solyc06g061180.1.1 | Tomato | nucleus | 42.86 | 38.03 |
| Solyc08g076960.1.1 | Tomato | extracellular | 44.97 | 36.8 |
| Solyc02g076770.1.1 | Tomato | cytosol | 41.27 | 35.78 |
| Solyc06g050500.2.1 | Tomato | plastid | 47.62 | 32.73 |
| Os06t0526466-00 | Rice | cytosol, mitochondrion | 21.16 | 28.99 |
Protein Annotations
| EnsemblPlants:Solyc08g082180.2.1 | EnsemblPlantsGene:Solyc08g082180.2 | Gene3D:3.30.530.20 | InterPro:IPR023393 | InterPro:Polyketide_cyclase/dehydratase | InterPro:START-like_dom_sf |
| PANTHER:PTHR31213 | PANTHER:PTHR31213:SF4 | PFAM:PF10604 | SUPFAM:SSF55961 | UniParc:UPI000276C4C4 | UniProt:K4CPL4 |
| MapMan:11.1.2.1.1.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr8:-:65037729..65040170
Molecular Weight (calculated)
21573.9 Da
IEP (calculated)
7.284
GRAVY (calculated)
-0.368
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSIMNVDRK ISSEDEYIRR HHRHDVRDNQ CSSSLVKHIK APVHLVWSLV RRFDQPQRYK PFVSRCIVQG DLEIGSVREV NVKSGLPATT SKERLELLDD
101: DEHIFGVKIV GGDHRLRNYS SIITVHPKVI DGRPGTMVVE SFVVDVPDGN TKDETCYFVE ALIRCNLKSL ADVSERLAVQ GHMEPIDRM
101: DEHIFGVKIV GGDHRLRNYS SIITVHPKVI DGRPGTMVVE SFVVDVPDGN TKDETCYFVE ALIRCNLKSL ADVSERLAVQ GHMEPIDRM
001: MMDGVEGGTA MYGGLETVQY VRTHHQHLCR ENQCTSALVK HIKAPLHLVW SLVRRFDQPQ KYKPFVSRCT VIGDPEIGSL REVNVKSGLP ATTSTERLEL
101: LDDEEHILGI KIIGGDHRLK NYSSILTVHP EIIEGRAGTM VIESFVVDVP QGNTKDETCY FVEALIRCNL KSLADVSERL ASQDITQ
101: LDDEEHILGI KIIGGDHRLK NYSSILTVHP EIIEGRAGTM VIESFVVDVP QGNTKDETCY FVEALIRCNL KSLADVSERL ASQDITQ
Arabidopsis Description
PYL9RCAR1 [Source:UniProtKB/TrEMBL;Acc:A0A178W4H4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.