Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90028 | Canola | cytosol | 96.24 | 95.21 |
| CDY15183 | Canola | cytosol | 94.09 | 93.58 |
| AT1G01360.1 | Thale cress | cytosol | 89.25 | 88.77 |
| CDX74368 | Canola | cytosol | 80.65 | 77.72 |
| VIT_02s0025g01340.t01 | Wine grape | cytosol | 75.81 | 76.22 |
| CDX91871 | Canola | cytosol | 78.49 | 75.65 |
| PGSC0003DMT400012888 | Potato | cytosol | 69.35 | 72.88 |
| PGSC0003DMT400031686 | Potato | cytosol | 73.66 | 72.49 |
| Solyc08g082180.2.1 | Tomato | cytosol | 73.66 | 72.49 |
| GSMUA_Achr10P... | Banana | cytosol | 72.04 | 72.04 |
| Solyc12g055990.1.1 | Tomato | cytosol | 69.89 | 71.82 |
| CDY49462 | Canola | cytosol | 70.97 | 71.74 |
| CDY61488 | Canola | cytosol | 69.89 | 70.65 |
| CDY25052 | Canola | cytosol | 70.97 | 70.59 |
| CDY07165 | Canola | cytosol | 22.58 | 70.0 |
| CDX96197 | Canola | cytosol | 70.43 | 69.68 |
| CDY64350 | Canola | cytosol | 68.28 | 69.4 |
| CDY27022 | Canola | cytosol | 69.35 | 68.62 |
| HORVU0Hr1G032390.2 | Barley | cytosol, extracellular | 31.72 | 68.6 |
| GSMUA_AchrUn_... | Banana | cytosol | 68.28 | 68.28 |
| CDY38728 | Canola | cytosol | 67.2 | 67.93 |
| CDY53905 | Canola | cytosol | 68.28 | 67.91 |
| GSMUA_Achr10P... | Banana | cytosol | 67.74 | 67.74 |
| GSMUA_Achr2P19970_001 | Banana | cytosol | 66.67 | 66.67 |
| Os02t0255500-01 | Rice | cytosol | 70.43 | 64.22 |
| TraesCS1D01G126900.1 | Wheat | cytosol | 69.89 | 63.41 |
| TraesCS1A01G126800.1 | Wheat | cytosol | 69.89 | 63.41 |
| Os05t0213500-01 | Rice | cytosol, nucleus | 70.97 | 63.16 |
| Zm00001d037719_P001 | Maize | cytosol | 66.67 | 62.94 |
| TraesCS1B01G145800.1 | Wheat | cytosol | 69.35 | 62.93 |
| CDX89219 | Canola | cytosol | 62.37 | 62.7 |
| CDY70517 | Canola | cytosol | 62.37 | 62.7 |
| GSMUA_Achr3P03480_001 | Banana | cytosol | 69.35 | 62.62 |
| EES04864 | Sorghum | cytosol | 70.97 | 62.56 |
| EES17886 | Sorghum | cytosol | 66.13 | 62.44 |
| Zm00001d010445_P001 | Maize | cytosol | 66.13 | 62.44 |
| Zm00001d016105_P001 | Maize | cytosol | 70.97 | 62.26 |
| Zm00001d053396_P001 | Maize | cytosol | 68.28 | 58.53 |
| GSMUA_Achr8P19910_001 | Banana | mitochondrion | 65.05 | 57.89 |
| Os02t0255300-00 | Rice | cytosol, plastid | 55.38 | 57.22 |
| GSMUA_Achr2P15420_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 69.89 | 57.02 |
| Zm00001d002533_P001 | Maize | cytosol | 38.17 | 56.35 |
| TraesCS7B01G232100.1 | Wheat | cytoskeleton, cytosol, nucleus | 56.45 | 53.85 |
| HORVU7Hr1G079270.1 | Barley | cytosol | 56.45 | 53.3 |
| TraesCS7D01G328000.1 | Wheat | cytosol | 55.91 | 52.79 |
| TraesCS7A01G350800.1 | Wheat | cytosol | 54.3 | 51.27 |
| Os06t0528300-00 | Rice | cytosol | 55.91 | 50.49 |
| Os06t0527800-01 | Rice | cytosol | 55.38 | 50.0 |
| Os06t0526400-00 | Rice | cytosol | 50.0 | 47.45 |
| CDY58053 | Canola | cytosol | 39.78 | 45.68 |
| CDY68675 | Canola | cytosol | 39.78 | 45.68 |
| HORVU1Hr1G030390.2 | Barley | extracellular, mitochondrion, plasma membrane | 69.89 | 44.67 |
| CDX91449 | Canola | plastid | 48.92 | 43.96 |
| CDY54453 | Canola | plastid | 48.39 | 43.27 |
| CDY54415 | Canola | cytosol | 46.77 | 42.65 |
| CDY18391 | Canola | plastid | 46.77 | 42.65 |
| CDY14471 | Canola | plastid | 46.77 | 42.03 |
| CDY07739 | Canola | plastid | 46.77 | 42.03 |
| HORVU3Hr1G054230.1 | Barley | mitochondrion | 35.48 | 41.51 |
| CDX78879 | Canola | cytosol | 36.56 | 40.96 |
| CDY58019 | Canola | cytosol | 36.56 | 40.96 |
| CDX99450 | Canola | cytosol | 36.56 | 40.96 |
| CDX90440 | Canola | cytosol | 41.94 | 40.84 |
| CDY01498 | Canola | cytosol | 41.94 | 40.84 |
| CDY04951 | Canola | cytosol | 43.01 | 40.61 |
| CDY69797 | Canola | cytosol | 41.4 | 40.31 |
| CDX70150 | Canola | cytosol | 44.09 | 40.2 |
| CDX98844 | Canola | cytosol | 44.09 | 40.2 |
| CDX93191 | Canola | cytosol | 43.55 | 39.9 |
| CDY70860 | Canola | cytosol | 39.78 | 39.78 |
| CDY52923 | Canola | cytosol | 43.55 | 39.51 |
| CDY72318 | Canola | cytosol | 43.01 | 39.41 |
| CDX80959 | Canola | cytosol | 43.01 | 39.41 |
| CDY24911 | Canola | cytosol, mitochondrion | 44.09 | 38.5 |
| CDY07608 | Canola | cytosol, mitochondrion | 43.55 | 38.21 |
| CDX76731 | Canola | cytosol | 38.17 | 37.77 |
| CDY11503 | Canola | cytosol | 38.17 | 37.77 |
| CDY58505 | Canola | nucleus | 42.47 | 37.62 |
| CDX74796 | Canola | cytosol, nucleus, plastid | 41.94 | 36.79 |
| CDX77691 | Canola | nucleus | 42.47 | 36.74 |
| CDY18867 | Canola | cytosol, mitochondrion, nucleus, plastid | 41.4 | 36.32 |
| CDY68316 | Canola | nucleus | 36.02 | 35.08 |
| CDY08877 | Canola | cytosol | 29.03 | 34.84 |
| CDX76554 | Canola | cytosol | 29.03 | 34.84 |
| CDY03194 | Canola | nucleus | 34.95 | 34.03 |
| CDY48030 | Canola | plastid | 34.41 | 31.22 |
| CDY22516 | Canola | plastid | 33.87 | 30.73 |
| CDX82120 | Canola | plastid | 33.87 | 30.73 |
| Os06t0526466-00 | Rice | cytosol, mitochondrion | 20.97 | 28.26 |
Protein Annotations
| EnsemblPlants:CDY04688 | EnsemblPlantsGene:GSBRNA2T00119307001 | Gene3D:3.30.530.20 | InterPro:IPR023393 | InterPro:Polyketide_cyclase/dehydratase | InterPro:START-like_dom_sf |
| PANTHER:PTHR31213 | PANTHER:PTHR31213:SF4 | PFAM:PF10604 | ProteinID:CDY04688 | ProteinID:CDY04688.1 | SUPFAM:SSF55961 |
| UniParc:UPI0004EE9B7E | MapMan:11.1.2.1.1.1 | : | : | : | : |
Description
BnaC05g17260D
Coordinates
chrLK031956:-:923718..924944
Molecular Weight (calculated)
21017.2 Da
IEP (calculated)
6.415
GRAVY (calculated)
-0.287
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGGTEMYGG LETMQYVRRH HQHNCREDQC TSALVKHIKV PVHLVWSVVR RFDEPQKYKP FVSRCTVIGD PEIGSLREVD VKSGLPATTS TERLELLDDN
101: EHIFGIKIIG GDHRLKNYSS IVTVHPEIIE GRPGTMVIES FVVDVPQGNT KDETCYFVEA LIRCNLKSLA HVSERLASQD IMNLSI
101: EHIFGIKIIG GDHRLKNYSS IVTVHPEIIE GRPGTMVIES FVVDVPQGNT KDETCYFVEA LIRCNLKSLA HVSERLASQD IMNLSI
001: MMDGVEGGTA MYGGLETVQY VRTHHQHLCR ENQCTSALVK HIKAPLHLVW SLVRRFDQPQ KYKPFVSRCT VIGDPEIGSL REVNVKSGLP ATTSTERLEL
101: LDDEEHILGI KIIGGDHRLK NYSSILTVHP EIIEGRAGTM VIESFVVDVP QGNTKDETCY FVEALIRCNL KSLADVSERL ASQDITQ
101: LDDEEHILGI KIIGGDHRLK NYSSILTVHP EIIEGRAGTM VIESFVVDVP QGNTKDETCY FVEALIRCNL KSLADVSERL ASQDITQ
Arabidopsis Description
PYL9RCAR1 [Source:UniProtKB/TrEMBL;Acc:A0A178W4H4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.