CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38728	Canola	cytosol	98.91	98.37
Bra029093.1-P	Field mustard	cytosol	98.36	97.83
CDY61488	Canola	cytosol	90.16	89.67
AT5G53160.2	Thale cress	cytosol, nucleus, peroxisome	91.8	89.36
CDY49462	Canola	cytosol	89.07	88.59
CDX96197	Canola	cytosol	88.52	86.17
CDY27022	Canola	cytosol	87.43	85.11
VIT_16s0050g02620.t01	Wine grape	cytosol	77.6	76.76
Solyc03g007310.2.1	Tomato	cytosol	77.05	76.22
PGSC0003DMT400023511	Potato	cytosol	77.05	76.22
KRH65845	Soybean	cytosol	78.14	74.09
KRH18155	Soybean	cytosol	76.5	73.3
CDY70517	Canola	cytosol	71.58	70.81
GSMUA_Achr10P...	Banana	cytosol	71.58	70.43
CDX89219	Canola	cytosol	71.04	70.27
KRH53449	Soybean	cytosol	71.58	68.59
CDY25052	Canola	cytosol	69.95	68.45
CDY15183	Canola	cytosol	69.95	68.45
GSMUA_Achr10P...	Banana	cytosol	69.4	68.28
CDY04688	Canola	cytosol	69.4	68.28
GSMUA_Achr2P19970_001	Banana	cytosol	69.4	68.28
GSMUA_AchrUn_...	Banana	cytosol	68.31	67.2
CDX90028	Canola	cytosol	68.31	66.49
HORVU0Hr1G032390.2	Barley	cytosol, extracellular	31.15	66.28
CDX74368	Canola	cytosol	68.85	65.28
CDY53905	Canola	cytosol	66.67	65.24
CDX91871	Canola	cytosol	68.31	64.77
Os02t0255500-01	Rice	cytosol	71.04	63.73
CDY07165	Canola	cytosol	20.77	63.33
GSMUA_Achr3P03480_001	Banana	cytosol	71.04	63.11
TraesCS1A01G126800.1	Wheat	cytosol	69.95	62.44
TraesCS1B01G145800.1	Wheat	cytosol	69.95	62.44
TraesCS1D01G126900.1	Wheat	cytosol	69.95	62.44
Os05t0213500-01	Rice	cytosol, nucleus	70.49	61.72
EES17886	Sorghum	cytosol	65.57	60.91
Zm00001d010445_P001	Maize	cytosol	65.03	60.41
Zm00001d037719_P001	Maize	cytosol	65.03	60.41
Zm00001d016105_P001	Maize	cytosol	69.95	60.38
EES04864	Sorghum	cytosol	69.4	60.19
GSMUA_Achr8P19910_001	Banana	mitochondrion	68.31	59.81
Zm00001d053396_P001	Maize	cytosol	66.67	56.22
KRH65286	Soybean	cytosol	27.87	56.04
GSMUA_Achr2P15420_001	Banana	cytosol, mitochondrion, nucleus, plastid	69.4	55.7
Zm00001d002533_P001	Maize	cytosol	37.7	54.76
KRH16733	Soybean	cytosol	31.15	54.29
Os02t0255300-00	Rice	cytosol, plastid	51.91	52.78
TraesCS7B01G232100.1	Wheat	cytoskeleton, cytosol, nucleus	55.19	51.79
HORVU7Hr1G079270.1	Barley	cytosol	54.64	50.76
Os06t0527800-01	Rice	cytosol	56.83	50.49
Os06t0528300-00	Rice	cytosol	56.83	50.49
TraesCS7D01G328000.1	Wheat	cytosol	53.55	49.75
Os06t0526400-00	Rice	cytosol	52.46	48.98
TraesCS7A01G350800.1	Wheat	cytosol	51.91	48.22
HORVU1Hr1G030390.2	Barley	extracellular, mitochondrion, plasma membrane	69.95	43.99
HORVU3Hr1G054230.1	Barley	mitochondrion	37.7	43.4
CDY68675	Canola	cytosol	37.7	42.59
CDY58053	Canola	cytosol	37.7	42.59
CDX91449	Canola	plastid	46.99	41.55
CDY69797	Canola	cytosol	43.17	41.36
CDX70150	Canola	cytosol	45.9	41.18
CDX98844	Canola	cytosol	45.9	41.18
CDY04951	Canola	cytosol	44.26	41.12
CDY54453	Canola	plastid	46.45	40.87
CDX90440	Canola	cytosol	42.62	40.84
CDY01498	Canola	cytosol	42.62	40.84
CDY54415	Canola	cytosol	45.36	40.69
CDY18391	Canola	plastid	45.36	40.69
CDY07739	Canola	plastid	45.9	40.58
CDY14471	Canola	plastid	45.9	40.58
CDX76731	Canola	cytosol	41.53	40.43
CDY11503	Canola	cytosol	41.53	40.43
CDY72318	Canola	cytosol	44.81	40.39
CDY70860	Canola	cytosol	40.98	40.32
CDX80959	Canola	cytosol	44.26	39.9
CDY58505	Canola	nucleus	45.36	39.52
CDX76554	Canola	cytosol	32.79	38.71
CDX77691	Canola	nucleus	45.36	38.6
CDX78879	Canola	cytosol	34.97	38.55
CDY58019	Canola	cytosol	34.97	38.55
CDX99450	Canola	cytosol	34.97	38.55
CDY08877	Canola	cytosol	32.24	38.06
CDX93191	Canola	cytosol	41.53	37.44
CDY52923	Canola	cytosol	41.53	37.07
CDY24911	Canola	cytosol, mitochondrion	42.62	36.62
CDY07608	Canola	cytosol, mitochondrion	42.08	36.32
CDY48030	Canola	plastid	39.89	35.61
CDX82120	Canola	plastid	39.34	35.12
CDY22516	Canola	plastid	39.34	35.12
CDX74796	Canola	cytosol, nucleus, plastid	40.44	34.91
CDY68316	Canola	nucleus	36.07	34.55
CDY18867	Canola	cytosol, mitochondrion, nucleus, plastid	39.89	34.43
CDY03194	Canola	nucleus	35.52	34.03
Os06t0526466-00	Rice	cytosol, mitochondrion	22.95	30.43

Protein Annotations

EnsemblPlants:CDY64350	EnsemblPlantsGene:GSBRNA2T00041140001	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase	InterPro:START-like_dom_sf
PANTHER:PTHR31213	PANTHER:PTHR31213:SF12	PFAM:PF10604	ProteinID:CDY64350	ProteinID:CDY64350.1	SUPFAM:SSF55961
UniParc:UPI0004EE4E7C	UniProt:A0A078JGB1	MapMan:11.1.2.1.1.1	:	:	:

Description

BnaA03g12450DBnaA03g12450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JGB1]

Coordinates

chrLK034448:-:13434..15547

Molecular Weight (calculated)

20666.7 Da

IEP (calculated)

6.716

GRAVY (calculated)

-0.379

Length

183 amino acids

Sequence
(BLAST)

001: MEANGTEMNQ EREYIRRHHK HALLENQCSS TLVKHIQAPV HIVWSLVRRF DQPQKYKPFI SRCVVKGNME IGTVREVDVK SGLPATRSTE RLELLDENEH
101: ILSKIVGGDH RLKNYSSVIS LHPETIEGGR IGTLVIESFV VDVPEGNTND ETCYFVEALI KCNLKSLADI SQRLAVQDTT AST

Best Arabidopsis Sequence Match ( AT5G53160.2 )
(BLAST)

001: MEANGIENLT NPNQEREFIR RHHKHELVDN QCSSTLVKHI NAPVHIVWSL VRRFDQPQKY KPFISRCVVK GNMEIGTVRE VDVKSGLPAT RSTERLELLD
101: DNEHILSIRI VGGDHRLKNY SSIISLHPET IEGRIGTLVI ESFVVDVPEG NTKDETCYFV EALIKCNLKS LADISERLAV QDTTESRV

Arabidopsis Description

PYL8RCAR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UJN3]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.