Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra009113.1-P | Field mustard | cytosol | 100.0 | 100.0 |
CDX98844 | Canola | cytosol | 99.02 | 99.02 |
AT5G05440.1 | Thale cress | cytosol | 96.57 | 97.04 |
CDY72318 | Canola | cytosol | 92.16 | 92.61 |
CDX80959 | Canola | cytosol | 91.67 | 92.12 |
CDY04951 | Canola | cytosol | 88.73 | 91.88 |
GSMUA_Achr9P04600_001 | Banana | cytosol | 40.69 | 58.04 |
TraesCS4A01G114400.1 | Wheat | cytosol | 50.49 | 57.54 |
TraesCS1B01G306800.1 | Wheat | mitochondrion | 53.92 | 56.7 |
CDY54415 | Canola | cytosol | 56.37 | 56.37 |
CDY18391 | Canola | plastid | 56.37 | 56.37 |
CDX91449 | Canola | plastid | 56.86 | 56.04 |
CDY07739 | Canola | plastid | 56.37 | 55.56 |
CDY54453 | Canola | plastid | 56.37 | 55.29 |
CDY14471 | Canola | plastid | 55.88 | 55.07 |
TraesCS1D01G293600.1 | Wheat | mitochondrion, plastid | 53.92 | 54.73 |
TraesCS1A01G297600.1 | Wheat | mitochondrion | 53.92 | 54.73 |
Zm00001d038436_P001 | Maize | plastid | 53.43 | 54.5 |
HORVU1Hr1G070420.1 | Barley | mitochondrion | 53.43 | 54.23 |
GSMUA_Achr6P32790_001 | Banana | cytosol | 54.9 | 53.08 |
HORVU3Hr1G039010.1 | Barley | plastid | 52.45 | 51.94 |
HORVU3Hr1G088100.1 | Barley | plastid | 52.45 | 51.94 |
TraesCS3A01G348400.1 | Wheat | plastid | 52.45 | 51.94 |
TraesCS3D01G342000.1 | Wheat | plastid | 52.45 | 51.94 |
TraesCS3B01G380300.1 | Wheat | mitochondrion, plastid | 52.45 | 51.69 |
EES19683 | Sorghum | plastid | 54.41 | 51.39 |
CDX93191 | Canola | cytosol | 50.98 | 51.23 |
Zm00001d043014_P001 | Maize | cytosol | 53.43 | 51.17 |
GSMUA_Achr9P17980_001 | Banana | cytosol | 37.25 | 51.01 |
TraesCS2D01G087500.1 | Wheat | plastid | 53.43 | 50.93 |
CDY52923 | Canola | cytosol | 50.98 | 50.73 |
GSMUA_AchrUn_... | Banana | plastid | 39.22 | 50.63 |
CDY58053 | Canola | cytosol | 40.2 | 50.62 |
CDY68675 | Canola | cytosol | 40.2 | 50.62 |
TraesCS2B01G105300.1 | Wheat | plastid | 53.43 | 50.23 |
Os05t0473000-01 | Rice | cytosol | 52.94 | 49.77 |
GSMUA_Achr11P... | Banana | cytosol, plastid | 38.24 | 49.37 |
CDY07608 | Canola | cytosol, mitochondrion | 50.98 | 49.06 |
GSMUA_Achr8P21220_001 | Banana | cytosol | 40.69 | 48.82 |
Zm00001d047705_P001 | Maize | plastid | 51.96 | 48.62 |
CDX74796 | Canola | cytosol, nucleus, plastid | 50.49 | 48.58 |
CDY24911 | Canola | cytosol, mitochondrion | 50.49 | 48.36 |
TraesCS4B01G189800.1 | Wheat | cytosol | 52.94 | 48.21 |
TraesCS4D01G191200.1 | Wheat | cytosol | 52.94 | 48.21 |
EER92405 | Sorghum | plastid | 52.45 | 48.2 |
CDY58019 | Canola | cytosol | 39.22 | 48.19 |
CDX99450 | Canola | cytosol | 39.22 | 48.19 |
CDX78879 | Canola | cytosol | 39.22 | 48.19 |
HORVU4Hr1G055220.1 | Barley | cytosol | 52.45 | 47.77 |
Zm00001d028793_P001 | Maize | cytosol, mitochondrion, plastid | 51.47 | 47.73 |
CDY18867 | Canola | cytosol, mitochondrion, nucleus, plastid | 49.02 | 47.17 |
GSMUA_Achr5P29490_001 | Banana | plastid | 37.25 | 46.91 |
Os03t0297600-01 | Rice | cytosol | 52.45 | 46.72 |
CDY64350 | Canola | cytosol | 41.18 | 45.9 |
CDY38728 | Canola | cytosol | 41.18 | 45.65 |
CDX89219 | Canola | cytosol | 41.18 | 45.41 |
CDY11503 | Canola | cytosol | 41.67 | 45.21 |
CDY15183 | Canola | cytosol | 41.18 | 44.92 |
CDY70517 | Canola | cytosol | 40.69 | 44.86 |
CDX76731 | Canola | cytosol | 41.18 | 44.68 |
CDX90440 | Canola | cytosol | 41.67 | 44.5 |
CDY01498 | Canola | cytosol | 41.67 | 44.5 |
CDX90028 | Canola | cytosol | 40.69 | 44.15 |
CDY04688 | Canola | cytosol | 40.2 | 44.09 |
CDY70860 | Canola | cytosol | 40.2 | 44.09 |
CDY49462 | Canola | cytosol | 39.71 | 44.02 |
CDY61488 | Canola | cytosol | 39.71 | 44.02 |
CDY25052 | Canola | cytosol | 40.2 | 43.85 |
CDX96197 | Canola | cytosol | 40.2 | 43.62 |
CDY27022 | Canola | cytosol | 40.2 | 43.62 |
CDY69797 | Canola | cytosol | 40.69 | 43.46 |
CDY53905 | Canola | cytosol | 39.22 | 42.78 |
GSMUA_Achr10P... | Banana | cytosol, plastid | 40.2 | 41.41 |
Os01t0827800-00 | Rice | plastid | 51.47 | 41.02 |
CDY48030 | Canola | plastid | 41.18 | 40.98 |
CDX74368 | Canola | cytosol | 38.73 | 40.93 |
CDX82120 | Canola | plastid | 40.69 | 40.49 |
CDY22516 | Canola | plastid | 40.69 | 40.49 |
CDY58505 | Canola | nucleus | 41.18 | 40.0 |
CDX91871 | Canola | cytosol | 37.75 | 39.9 |
CDX77691 | Canola | nucleus | 41.18 | 39.07 |
CDX76554 | Canola | cytosol | 29.41 | 38.71 |
TraesCS2A01G089400.1 | Wheat | plastid | 53.92 | 38.46 |
OQU87775 | Sorghum | endoplasmic reticulum, extracellular | 50.98 | 38.24 |
CDY68316 | Canola | nucleus | 35.78 | 38.22 |
CDY08877 | Canola | cytosol | 28.92 | 38.06 |
CDY03194 | Canola | nucleus | 34.8 | 37.17 |
Zm00001d012475_P001 | Maize | cytosol | 53.92 | 35.26 |
CDY07165 | Canola | cytosol | 9.8 | 33.33 |
Protein Annotations
EnsemblPlants:CDX70150 | EnsemblPlantsGene:GSBRNA2T00136262001 | Gene3D:3.30.530.20 | InterPro:IPR023393 | InterPro:Polyketide_cyclase/dehydratase | InterPro:START-like_dom_sf |
PANTHER:PTHR31213 | PANTHER:PTHR31213:SF3 | PFAM:PF10604 | ProteinID:CDX70150 | ProteinID:CDX70150.1 | SUPFAM:SSF55961 |
UniParc:UPI0002544A89 | MapMan:11.1.2.1.1.1 | : | : | : | : |
Description
BnaA10g24990D
Coordinates
chrLK031790:-:3330038..3330652
Molecular Weight (calculated)
22781.0 Da
IEP (calculated)
6.502
GRAVY (calculated)
-0.328
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSPVQLHHG SDATNGFHTL QTHDQTDGLI RRVCLTRGMH VPEHVAMHHT HDVGPDQCCS SVVQMIHAPP ESVWALVRRF DNPKVYKNFI RQCRIVQGDG
101: LHAGDLREVM VVSGLPAVSS TERLEILDEE RHVISFSVVG GDHRLKNYRS VTTLHASDDE GTVVVESYIV DVPPGNTEEE TVSFVDTIVR CNLQSLARSC
201: TNRQ
101: LHAGDLREVM VVSGLPAVSS TERLEILDEE RHVISFSVVG GDHRLKNYRS VTTLHASDDE GTVVVESYIV DVPPGNTEEE TVSFVDTIVR CNLQSLARSC
201: TNRQ
001: MRSPVQLQHG SDATNGFHTL QPHDQTDGPI KRVCLTRGMH VPEHVAMHHT HDVGPDQCCS SVVQMIHAPP ESVWALVRRF DNPKVYKNFI RQCRIVQGDG
101: LHVGDLREVM VVSGLPAVSS TERLEILDEE RHVISFSVVG GDHRLKNYRS VTTLHASDDE GTVVVESYIV DVPPGNTEEE TLSFVDTIVR CNLQSLARST
201: NRQ
101: LHVGDLREVM VVSGLPAVSS TERLEILDEE RHVISFSVVG GDHRLKNYRS VTTLHASDDE GTVVVESYIV DVPPGNTEEE TLSFVDTIVR CNLQSLARST
201: NRQ
Arabidopsis Description
PYL5Abscisic acid receptor PYL5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLB1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.