Skip to main content
crop-pal logo
Rice
Search for another protein from :
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • nucleus 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, nucleus, plastid
BaCelLo:plastid
EpiLoc:nucleus
iPSORT:plastid
MultiLoc:plastid
Plant-mPloc:cytosol, plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
Os01t0583100-01
Os01t0846300-01
Os03t0268600-01
Os05t0537400-00
Os05t0592800-02
Os06t0531000-00
Os06t0622500-00
Os09t0325700-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G38310.1 Os01t0583100-01 AT1G72770.1 19407142
AT2G38310.1 Os05t0537400-00 AT1G72770.1 19407142
AT2G38310.1 Os05t0592800-02 AT1G72770.1 19407142
AT2G38310.1 Os01t0583100-01 AT1G72770.1 19624469
AT2G38310.1 Os05t0537400-00 AT1G72770.1 19624469
AT2G38310.1 Os05t0592800-02 AT1G72770.1 19624469
AT2G38310.1 Os01t0846300-01 AT3G11410.1 19407142
AT2G38310.1 Os03t0268600-01 AT3G11410.1 19407142
AT2G38310.1 Os09t0325700-01 AT3G11410.1 19407142
AT2G38310.1 Os06t0531000-00 AT4G18340.1 19407142
AT2G38310.1 Os01t0846300-01 AT5G59220.1 19407142
AT2G38310.1 Os03t0268600-01 AT5G59220.1 19407142
AT2G38310.1 Os09t0325700-01 AT5G59220.1 19407142
AT2G40330.1 Os01t0583100-01 AT1G72770.1 19407142
AT2G40330.1 Os05t0537400-00 AT1G72770.1 19407142
AT2G40330.1 Os05t0592800-02 AT1G72770.1 19407142
AT2G40330.1 Os01t0583100-01 AT1G72770.1 19624469
AT2G40330.1 Os05t0537400-00 AT1G72770.1 19624469
AT2G40330.1 Os05t0592800-02 AT1G72770.1 19624469
AT2G40330.1 Os06t0622500-00 AT2G20000.1 17944809
AT5G05440.1 Os01t0583100-01 AT1G72770.1 19407142
AT5G05440.1 Os05t0537400-00 AT1G72770.1 19407142
AT5G05440.1 Os05t0592800-02 AT1G72770.1 19407142
AT5G05440.1 Os01t0583100-01 AT1G72770.1 19624469
AT5G05440.1 Os05t0537400-00 AT1G72770.1 19624469
AT5G05440.1 Os05t0592800-02 AT1G72770.1 19624469
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d038436_P001 Maize plastid 60.55 77.5
TraesCS3D01G342000.1 Wheat plastid 62.11 77.18
HORVU3Hr1G088100.1 Barley plastid 62.11 77.18
HORVU3Hr1G039010.1 Barley plastid 62.11 77.18
TraesCS3A01G348400.1 Wheat plastid 61.72 76.7
TraesCS3B01G380300.1 Wheat mitochondrion, plastid 60.94 75.36
Os05t0473000-01 Rice cytosol 63.28 74.65
EES19683 Sorghum plastid 61.72 73.15
Zm00001d043014_P001 Maize cytosol 55.08 66.2
KRH00319 Soybean cytosol 43.36 62.71
Bra028758.1-P Field mustard cytosol 40.23 62.42
KRH49452 Soybean plastid 42.58 61.24
Solyc05g052420.1.1 Tomato cytosol 19.14 59.76
Os03t0297600-01 Rice cytosol 53.12 59.39
GSMUA_Achr5P29490_001 Banana plastid 37.5 59.26
GSMUA_Achr11P... Banana cytosol, plastid 35.94 58.23
PGSC0003DMT400053120 Potato cytosol, plastid 44.14 56.22
PGSC0003DMT400053119 Potato cytosol, plastid 44.14 56.22
Solyc03g095780.1.1 Tomato plastid 44.14 56.22
PGSC0003DMT400053102 Potato cytosol, plastid 44.14 56.22
CDX93191 Canola cytosol 44.14 55.66
CDY18391 Canola plastid 44.14 55.39
Bra017125.1-P Field mustard plastid 44.14 55.39
CDY54415 Canola cytosol 44.14 55.39
Bra017012.1-P Field mustard cytosol 44.14 55.12
CDY52923 Canola cytosol 44.14 55.12
KRH73249 Soybean plastid 44.53 54.81
VIT_13s0067g01940.t01 Wine grape plastid 45.31 54.72
KRH76014 Soybean cytosol 46.09 54.63
CDX91449 Canola plastid 44.14 54.59
Solyc10g085310.1.1 Tomato plastid 45.31 54.46
Bra000052.1-P Field mustard plastid 43.75 54.11
CDY07739 Canola plastid 43.75 54.11
PGSC0003DMT400028658 Potato nucleus 44.92 53.99
CDX74796 Canola cytosol, nucleus, plastid 44.53 53.77
Solyc10g076410.1.1 Tomato plastid 42.58 53.69
AT2G38310.1 Thale cress plastid 43.36 53.62
CDY14471 Canola plastid 43.36 53.62
CDY54453 Canola plastid 43.36 53.37
CDY04951 Canola cytosol 41.02 53.3
Bra004967.1-P Field mustard mitochondrion 43.75 52.83
Solyc09g015380.1.1 Tomato plastid 41.41 52.74
AT5G05440.1 Thale cress cytosol 41.8 52.71
Bra005115.1-P Field mustard plastid 30.47 52.35
PGSC0003DMT400061535 Potato plastid 44.53 52.29
OQU87775 Sorghum endoplasmic reticulum, extracellular 55.47 52.21
PGSC0003DMT400041080 Potato mitochondrion 42.19 52.17
CDX98844 Canola cytosol 41.41 51.96
PGSC0003DMT400069734 Potato mitochondrion, plastid 42.19 51.92
CDY18867 Canola cytosol, mitochondrion, nucleus, plastid 42.97 51.89
AT2G40330.1 Thale cress cytosol 43.36 51.63
CDX70150 Canola cytosol 41.02 51.47
Bra009113.1-P Field mustard cytosol 41.02 51.47
KRH14908 Soybean plastid 43.36 50.92
CDY72318 Canola cytosol 40.23 50.74
Bra005853.1-P Field mustard cytosol 40.23 50.74
CDX80959 Canola cytosol 39.84 50.25
CDY24911 Canola cytosol, mitochondrion 41.8 50.23
VIT_08s0058g00470.t01 Wine grape plastid 44.53 50.22
PGSC0003DMT400075056 Potato plastid 41.41 49.53
CDY07608 Canola cytosol, mitochondrion 41.02 49.53
Bra000184.1-P Field mustard cytosol, mitochondrion 41.02 49.53
Os06t0562200-01 Rice cytosol 38.28 47.34
Os02t0226801-00 Rice cytosol 37.89 46.19
Zm00001d012475_P001 Maize cytosol 55.47 45.51
Os02t0255300-00 Rice cytosol, plastid 31.64 45.0
Os10t0573400-01 Rice plasma membrane 36.33 43.87
Os02t0255500-01 Rice cytosol 34.77 43.63
KRH31193 Soybean cytosol, golgi, plastid 42.58 42.41
Solyc06g050500.2.1 Tomato plastid 45.31 42.18
Os05t0213500-01 Rice cytosol, nucleus 34.38 42.11
Os06t0526400-00 Rice cytosol 28.91 37.76
Os06t0527800-01 Rice cytosol 29.69 36.89
Os06t0528300-00 Rice cytosol 29.3 36.41
Os06t0526466-00 Rice cytosol, mitochondrion 9.77 18.12
Protein Annotations
EnsemblPlants:Os01t0827800-00EnsemblPlantsGene:Os01g0827800EntrezGene:107276820Gene3D:3.30.530.20InterPro:IPR023393InterPro:Polyketide_cyclase/dehydratase
InterPro:START-like_dom_sfPANTHER:PTHR31213PANTHER:PTHR31213:SF28PFAM:PF10604ProteinID:BAS75031.1RefSeq:XP_015643625.1
SEG:segSUPFAM:SSF55961UniParc:UPI0003939C0BUniProt:A0A0P0V9X6MapMan:11.1.2.1.1.1:
Description
PYRABACTIN RESISTANCE 1 LIKE/REGULATORY COMPONENTS OF ABA RECEPTOR 1, pyrabactin resistance-like 1Similar to AT-rich element binding factor 3. (Os01t0827800-00)
Coordinates
chr1:+:35420889..35421862
Molecular Weight (calculated)
27781.1 Da
IEP (calculated)
9.262
GRAVY (calculated)
-0.214
Length
256 amino acids
Sequence
(BLAST)
001: MQPSTSCLTN DAYKISGTRT FVVNPDPPLS VSFLLYRGKR RQRRALDTMP YAAVRPSPPP QLSRPIGSGA GGGKACPAVP CEVARYHEHA VGAGQCFSTV
101: VQAIAAPADA VWSVVRRFDR PQAYKKFIKS CRLVDGDGGE VGSVREVRVV SGLPATSSRE RLEVLDDDRR VLSFRIVGGE HRLANYRSVT TVHEAAAPAM
201: AVVVESYVVD VPPGNTWEET RVFVDTIVRC NLQSLARTVE RLAPEAPRAN GSIDHA
Best Arabidopsis Sequence Match ( AT5G05440.1 )
(BLAST)
001: MRSPVQLQHG SDATNGFHTL QPHDQTDGPI KRVCLTRGMH VPEHVAMHHT HDVGPDQCCS SVVQMIHAPP ESVWALVRRF DNPKVYKNFI RQCRIVQGDG
101: LHVGDLREVM VVSGLPAVSS TERLEILDEE RHVISFSVVG GDHRLKNYRS VTTLHASDDE GTVVVESYIV DVPPGNTEEE TLSFVDTIVR CNLQSLARST
201: NRQ
Arabidopsis Description
PYL5Abscisic acid receptor PYL5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLB1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.