Factsheet for PGSC0003DMT400075056

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400006608
PGSC0003DMT400043146
PGSC0003DMT400046382
PGSC0003DMT400049695
PGSC0003DMT400069947

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38310.1	PGSC0003DMT400006608	AT1G72770.1	19407142
AT2G38310.1	PGSC0003DMT400006608	AT1G72770.1	19624469
AT2G38310.1	PGSC0003DMT400043146	AT3G11410.1	19407142
AT2G38310.1	PGSC0003DMT400069947	AT3G11410.1	19407142
AT2G38310.1	PGSC0003DMT400046382	AT4G26080.1	19407142
AT2G38310.1	PGSC0003DMT400049695	AT5G59220.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g015380.1.1	Tomato	plastid	87.85	93.53
PGSC0003DMT400041080	Potato	mitochondrion	72.43	74.88
PGSC0003DMT400028658	Potato	nucleus	73.83	74.18
KRH00319	Soybean	cytosol	59.81	72.32
KRH49452	Soybean	plastid	58.41	70.22
PGSC0003DMT400053120	Potato	cytosol, plastid	64.02	68.16
PGSC0003DMT400053119	Potato	cytosol, plastid	64.02	68.16
PGSC0003DMT400053102	Potato	cytosol, plastid	64.02	68.16
VIT_08s0058g00470.t01	Wine grape	plastid	71.03	66.96
KRH76014	Soybean	cytosol	66.82	66.2
VIT_13s0067g01940.t01	Wine grape	plastid	64.95	65.57
PGSC0003DMT400061535	Potato	plastid	64.95	63.76
CDY18391	Canola	plastid	59.35	62.25
CDY54415	Canola	cytosol	59.35	62.25
Bra017125.1-P	Field mustard	plastid	59.35	62.25
AT2G38310.1	Thale cress	plastid	59.35	61.35
Bra000052.1-P	Field mustard	plastid	58.88	60.87
CDY07739	Canola	plastid	58.88	60.87
CDY14471	Canola	plastid	58.88	60.87
CDX91449	Canola	plastid	58.88	60.87
CDY54453	Canola	plastid	58.88	60.58
PGSC0003DMT400069734	Potato	mitochondrion, plastid	58.41	60.1
Bra005115.1-P	Field mustard	plastid	41.59	59.73
GSMUA_Achr9P04600_001	Banana	cytosol	39.72	59.44
TraesCS4A01G114400.1	Wheat	cytosol	49.53	59.22
Zm00001d038436_P001	Maize	plastid	52.34	56.0
GSMUA_Achr6P32790_001	Banana	cytosol	55.14	55.92
TraesCS1B01G306800.1	Wheat	mitochondrion	50.0	55.15
TraesCS1A01G297600.1	Wheat	mitochondrion	50.93	54.23
TraesCS1D01G293600.1	Wheat	mitochondrion, plastid	50.47	53.73
HORVU1Hr1G070420.1	Barley	mitochondrion	50.47	53.73
GSMUA_Achr5P29490_001	Banana	plastid	40.65	53.7
TraesCS2D01G087500.1	Wheat	plastid	53.27	53.27
TraesCS2B01G105300.1	Wheat	plastid	53.74	53.0
TraesCS3B01G380300.1	Wheat	mitochondrion, plastid	50.93	52.66
HORVU3Hr1G088100.1	Barley	plastid	50.47	52.43
HORVU3Hr1G039010.1	Barley	plastid	50.47	52.43
Os05t0473000-01	Rice	cytosol	52.8	52.07
TraesCS3A01G348400.1	Wheat	plastid	50.0	51.94
GSMUA_AchrUn_...	Banana	plastid	38.32	51.9
EES19683	Sorghum	plastid	52.34	51.85
TraesCS3D01G342000.1	Wheat	plastid	49.53	51.46
GSMUA_Achr11P...	Banana	cytosol, plastid	37.38	50.63
GSMUA_Achr9P17980_001	Banana	cytosol	35.05	50.34
Zm00001d043014_P001	Maize	cytosol	50.0	50.23
TraesCS4B01G189800.1	Wheat	cytosol	51.87	49.55
TraesCS4D01G191200.1	Wheat	cytosol	51.87	49.55
EER92405	Sorghum	plastid	51.4	49.55
Zm00001d047705_P001	Maize	plastid	50.47	49.54
PGSC0003DMT400075340	Potato	cytosol	43.93	49.47
Os03t0297600-01	Rice	cytosol	52.8	49.34
HORVU4Hr1G055220.1	Barley	cytosol	51.4	49.11
Zm00001d028793_P001	Maize	cytosol, mitochondrion, plastid	50.47	49.09
PGSC0003DMT400012888	Potato	cytosol	40.19	48.59
PGSC0003DMT400077008	Potato	cytosol	42.06	47.87
PGSC0003DMT400023511	Potato	cytosol	39.72	45.95
PGSC0003DMT400000606	Potato	cytosol	39.72	45.7
PGSC0003DMT400031686	Potato	cytosol	39.72	44.97
GSMUA_Achr8P21220_001	Banana	cytosol	35.51	44.71
GSMUA_Achr10P...	Banana	cytosol, plastid	39.72	42.93
PGSC0003DMT400005378	Potato	nucleus	42.52	42.72
PGSC0003DMT400045156	Potato	nucleus	45.79	42.42
Os01t0827800-00	Rice	plastid	49.53	41.41
TraesCS2A01G089400.1	Wheat	plastid	53.27	39.86
PGSC0003DMT400026521	Potato	cytosol	35.51	39.79
OQU87775	Sorghum	endoplasmic reticulum, extracellular	48.6	38.24
Zm00001d012475_P001	Maize	cytosol	48.6	33.33

Protein Annotations

EnsemblPlants:PGSC0003DMT400075056	EnsemblPlantsGene:PGSC0003DMG400029194	EntrezGene:102602772	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase
InterPro:START-like_dom_sf	PANTHER:PTHR31213	PANTHER:PTHR31213:SF3	PFAM:PF10604	PGSC:PGSC0003DMG400029194	RefSeq:XP_006359557.1
SEG:seg	SUPFAM:SSF55961	UniParc:UPI000296A2A2	UniProt:M1CUL1	MapMan:11.1.2.1.1.1	:

Description

Abscisic acid receptor PYL4 [Source:PGSC_GENE;Acc:PGSC0003DMG400029194]

Coordinates

chr9:+:10575747..10576691

Molecular Weight (calculated)

23369.6 Da

IEP (calculated)

8.400

GRAVY (calculated)

-0.286

Length

214 amino acids

Sequence
(BLAST)

001: MPPKSSLLLQ RINPTTTSTT TTTATSGKQL QRRTPIPCTT QVPDSVTTHH THSVSPNQCC SAVIQHISAP ISTVWSVLRR FDNPQAYKHF VKSCHVIGGD
101: GNVGTVREVR VISGLPAANS MERLEILDEE RHVISFSVVG GDHRLVNYRS VTTLHSDQNS GNVGTTIVVE SYVVDIPHGN TKEETCVFVD TIVKCNLQSL
201: AQIAQNSTRR NTAN

Best Arabidopsis Sequence Match ( AT2G40330.1 )
(BLAST)

001: MPTSIQFQRS STAAEAANAT VRNYPHHHQK QVQKVSLTRG MADVPEHVEL SHTHVVGPSQ CFSVVVQDVE APVSTVWSIL SRFEHPQAYK HFVKSCHVVI
101: GDGREVGSVR EVRVVSGLPA AFSLERLEIM DDDRHVISFS VVGGDHRLMN YKSVTTVHES EEDSDGKKRT RVVESYVVDV PAGNDKEETC SFADTIVRCN
201: LQSLAKLAEN TSKFS

Arabidopsis Description

PYL6Abscisic acid receptor PYL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8E3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.