Factsheet for PGSC0003DMT400045156

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g076960.1.1	Tomato	extracellular	92.64	92.64
PGSC0003DMT400005378	Potato	nucleus	65.37	70.89
GSMUA_Achr4P19170_001	Banana	cytosol	50.22	59.79
GSMUA_Achr8P14780_001	Banana	cytosol	51.08	57.28
Zm00001d030045_P001	Maize	cytosol	52.38	57.08
Zm00001d047037_P001	Maize	cytosol	50.22	56.59
OQU92088	Sorghum	cytosol	51.52	56.13
PGSC0003DMT400077008	Potato	cytosol	45.45	55.85
PGSC0003DMT400075340	Potato	cytosol	45.45	55.26
TraesCS1A01G191700.1	Wheat	cytosol	49.78	54.5
TraesCS1D01G195300.1	Wheat	cytosol	50.22	54.46
Os10t0573400-01	Rice	plasma membrane	49.78	54.25
TraesCS1B01G206600.1	Wheat	cytosol, unclear	49.35	53.52
PGSC0003DMT400053120	Potato	cytosol, plastid	41.56	47.76
PGSC0003DMT400053119	Potato	cytosol, plastid	41.56	47.76
PGSC0003DMT400053102	Potato	cytosol, plastid	41.56	47.76
PGSC0003DMT400012888	Potato	cytosol	35.93	46.89
PGSC0003DMT400000606	Potato	cytosol	37.66	46.77
PGSC0003DMT400028658	Potato	nucleus	42.42	46.01
PGSC0003DMT400075056	Potato	plastid	42.42	45.79
PGSC0003DMT400023511	Potato	cytosol	36.36	45.41
PGSC0003DMT400041080	Potato	mitochondrion	39.83	44.44
PGSC0003DMT400031686	Potato	cytosol	35.93	43.92
PGSC0003DMT400069734	Potato	mitochondrion, plastid	38.53	42.79
PGSC0003DMT400061535	Potato	plastid	39.83	42.2
HORVU1Hr1G050110.1	Barley	plastid	49.78	41.97
PGSC0003DMT400026521	Potato	cytosol	32.9	39.79

Protein Annotations

EMBL:KJ660844	EnsemblPlants:PGSC0003DMT400045156	EnsemblPlantsGene:PGSC0003DMG400017514	EntrezGene:102596997	Gene3D:3.30.530.20	InterPro:IPR023393
InterPro:Polyketide_cyclase/dehydratase	InterPro:START-like_dom_sf	PANTHER:PTHR31213	PANTHER:PTHR31213:SF6	PFAM:PF10604	PGSC:PGSC0003DMG400017514
RefSeq:NP_001284559.1	SUPFAM:SSF55961	UniParc:UPI000294BA46	UniProt:M1BH64	MapMan:11.1.2.1.1.1	:

Description

Abscisic acid receptor PYL1 [Source:PGSC_GENE;Acc:PGSC0003DMG400017514]

Coordinates

chr8:-:49657262..49658162

Molecular Weight (calculated)

25287.3 Da

IEP (calculated)

4.974

GRAVY (calculated)

-0.401

Length

231 amino acids

Sequence
(BLAST)

001: MDSKPETSLD NAVHQLSEPG SQTGSSPTTI TTHHLTVPPG LTPEEFQELS SSIAEFHSYR INSGQCSSLL AQRIHAPADT VWTVVRRFDK PQTYKHFIKS
101: CSVGEDFCMA VGSTRDVTVI SGLPAATSTE RLDILDDDRH VTGFSIIGGE HRLRNYRSVT TVHGFERDGE IWTVVLESYV VDIPEGNTEE DTRLFADTVV
201: KLNLQKLASV TETLAREAGN GGGDSSDVSH R

Best Arabidopsis Sequence Match ( AT4G17870.1 )
(BLAST)

001: MPSELTPEER SELKNSIAEF HTYQLDPGSC SSLHAQRIHA PPELVWSIVR RFDKPQTYKH FIKSCSVEQN FEMRVGCTRD VIVISGLPAN TSTERLDILD
101: DERRVTGFSI IGGEHRLTNY KSVTTVHRFE KENRIWTVVL ESYVVDMPEG NSEDDTRMFA DTVVKLNLQK LATVAEAMAR NSGDGSGSQV T

Arabidopsis Description

PYR1Abscisic acid receptor PYR1 [Source:UniProtKB/Swiss-Prot;Acc:O49686]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.