Factsheet for PGSC0003DMT400061535

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400006585
PGSC0003DMT400006608
PGSC0003DMT400083452

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G40330.1	PGSC0003DMT400006608	AT1G72770.1	19407142
AT2G40330.1	PGSC0003DMT400006608	AT1G72770.1	19624469
AT2G40330.1	PGSC0003DMT400006585	AT2G20000.1	17944809
AT2G40330.1	PGSC0003DMT400083452	AT2G20000.1	17944809

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400053119	Potato	cytosol, plastid	72.48	78.61
PGSC0003DMT400053102	Potato	cytosol, plastid	72.48	78.61
PGSC0003DMT400053120	Potato	cytosol, plastid	72.48	78.61
Solyc06g050500.2.1	Tomato	plastid	92.66	73.45
PGSC0003DMT400069734	Potato	mitochondrion, plastid	66.97	70.19
PGSC0003DMT400028658	Potato	nucleus	63.76	65.26
PGSC0003DMT400075056	Potato	plastid	63.76	64.95
KRH73249	Soybean	plastid	61.93	64.9
PGSC0003DMT400041080	Potato	mitochondrion	61.01	64.25
TraesCS4A01G114400.1	Wheat	cytosol	50.46	61.45
KRH14908	Soybean	plastid	60.55	60.55
TraesCS1B01G306800.1	Wheat	mitochondrion	52.29	58.76
GSMUA_Achr6P32790_001	Banana	cytosol	56.42	58.29
TraesCS1D01G293600.1	Wheat	mitochondrion, plastid	53.67	58.21
GSMUA_Achr9P04600_001	Banana	cytosol	38.07	58.04
Zm00001d038436_P001	Maize	plastid	53.21	58.0
TraesCS1A01G297600.1	Wheat	mitochondrion	53.21	57.71
CDX93191	Canola	cytosol	52.75	56.65
TraesCS3B01G380300.1	Wheat	mitochondrion, plastid	53.67	56.52
TraesCS3D01G342000.1	Wheat	plastid	53.21	56.31
HORVU1Hr1G070420.1	Barley	mitochondrion	51.83	56.22
HORVU3Hr1G039010.1	Barley	plastid	52.75	55.83
HORVU3Hr1G088100.1	Barley	plastid	52.75	55.83
TraesCS3A01G348400.1	Wheat	plastid	52.75	55.83
Bra017012.1-P	Field mustard	cytosol	52.29	55.61
CDY52923	Canola	cytosol	52.29	55.61
TraesCS2D01G087500.1	Wheat	plastid	54.13	55.14
AT2G40330.1	Thale cress	cytosol	54.13	54.88
CDX74796	Canola	cytosol, nucleus, plastid	53.21	54.72
EES19683	Sorghum	plastid	54.13	54.63
GSMUA_Achr11P...	Banana	cytosol, plastid	39.45	54.43
TraesCS2B01G105300.1	Wheat	plastid	54.13	54.38
GSMUA_Achr9P17980_001	Banana	cytosol	37.16	54.36
Zm00001d043014_P001	Maize	cytosol	52.75	53.99
Os05t0473000-01	Rice	cytosol	53.67	53.92
Bra004967.1-P	Field mustard	mitochondrion	52.29	53.77
KRH31193	Soybean	cytosol, golgi, plastid	62.84	53.31
GSMUA_AchrUn_...	Banana	plastid	38.53	53.16
GSMUA_Achr5P29490_001	Banana	plastid	38.99	52.47
Bra000184.1-P	Field mustard	cytosol, mitochondrion	50.92	52.36
CDY18867	Canola	cytosol, mitochondrion, nucleus, plastid	50.92	52.36
CDY07608	Canola	cytosol, mitochondrion	50.92	52.36
TraesCS4B01G189800.1	Wheat	cytosol	53.67	52.23
TraesCS4D01G191200.1	Wheat	cytosol	53.67	52.23
CDY24911	Canola	cytosol, mitochondrion	50.92	52.11
Zm00001d047705_P001	Maize	plastid	51.83	51.83
HORVU4Hr1G055220.1	Barley	cytosol	53.21	51.79
PGSC0003DMT400077008	Potato	cytosol	44.04	51.06
PGSC0003DMT400075340	Potato	cytosol	44.5	51.05
EER92405	Sorghum	plastid	51.83	50.9
Zm00001d028793_P001	Maize	cytosol, mitochondrion, plastid	50.92	50.45
Os03t0297600-01	Rice	cytosol	52.29	49.78
PGSC0003DMT400023511	Potato	cytosol	42.2	49.73
PGSC0003DMT400000606	Potato	cytosol	41.74	48.92
PGSC0003DMT400012888	Potato	cytosol	38.99	48.02
GSMUA_Achr8P21220_001	Banana	cytosol	37.16	47.65
PGSC0003DMT400031686	Potato	cytosol	40.37	46.56
Os01t0827800-00	Rice	plastid	52.29	44.53
PGSC0003DMT400005378	Potato	nucleus	43.12	44.13
GSMUA_Achr10P...	Banana	cytosol, plastid	38.53	42.42
TraesCS2A01G089400.1	Wheat	plastid	54.13	41.26
OQU87775	Sorghum	endoplasmic reticulum, extracellular	50.46	40.44
PGSC0003DMT400026521	Potato	cytosol	35.32	40.31
PGSC0003DMT400045156	Potato	nucleus	42.2	39.83
Zm00001d012475_P001	Maize	cytosol	52.29	36.54

Protein Annotations

EnsemblPlants:PGSC0003DMT400061535	EnsemblPlantsGene:PGSC0003DMG400023949	EntrezGene:102580526	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase
InterPro:START-like_dom_sf	PANTHER:PTHR31213	PANTHER:PTHR31213:SF48	PFAM:PF10604	PGSC:PGSC0003DMG400023949	RefSeq:XP_006353422.1
SUPFAM:SSF55961	UniParc:UPI000296B341	UniProt:M1C7N0	MapMan:11.1.2.1.1.1	:	:

Description

Abscisic acid receptor PYL4 [Source:PGSC_GENE;Acc:PGSC0003DMG400023949]

Coordinates

chr6:-:30365180..30366374

Molecular Weight (calculated)

23997.3 Da

IEP (calculated)

6.902

GRAVY (calculated)

-0.235

Length

218 amino acids

Sequence
(BLAST)

001: MPSSLQLHRI NPNTATLAVN NFHKQPQLSQ ATTWFSPVSI SVPDNVLHYH THVVGPNQCC SAVLQSISAP IDTVWSLVRR FDNPQAYKHF LKSCHVIVGD
101: GDVGTLREVL VVSGLPAGSS TERLEILDDE KHVLSFSVVG GDHRLNNYRS VTTLHRAAEE GSTVVVESYE VDVPQGNTKE ETCVFVDTIV RCNLQSLAQI
201: AQNKAKTSKS NKLTMNHD

Best Arabidopsis Sequence Match ( AT2G38310.1 )
(BLAST)

001: MLAVHRPSSA VSDGDSVQIP MMIASFQKRF PSLSRDSTAA RFHTHEVGPN QCCSAVIQEI SAPISTVWSV VRRFDNPQAY KHFLKSCSVI GGDGDNVGSL
101: RQVHVVSGLP AASSTERLDI LDDERHVISF SVVGGDHRLS NYRSVTTLHP SPISGTVVVE SYVVDVPPGN TKEETCDFVD VIVRCNLQSL AKIAENTAAE
201: SKKKMSL

Arabidopsis Description

PYL4Abscisic acid receptor PYL4 [Source:UniProtKB/Swiss-Prot;Acc:O80920]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.