Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G191200.1 | Wheat | cytosol | 99.44 | 79.46 |
| TraesCS4B01G189800.1 | Wheat | cytosol | 98.88 | 79.02 |
| HORVU4Hr1G055220.1 | Barley | cytosol | 97.77 | 78.12 |
| Zm00001d047705_P001 | Maize | plastid | 87.71 | 72.02 |
| Zm00001d028793_P001 | Maize | cytosol, mitochondrion, plastid | 88.27 | 71.82 |
| EER92405 | Sorghum | plastid | 88.83 | 71.62 |
| Os03t0297600-01 | Rice | cytosol | 90.5 | 70.74 |
| KRH00319 | Soybean | cytosol | 64.8 | 65.54 |
| KRH49452 | Soybean | plastid | 63.69 | 64.04 |
| GSMUA_Achr9P04600_001 | Banana | cytosol | 50.84 | 63.64 |
| Bra028758.1-P | Field mustard | cytosol | 56.98 | 61.82 |
| GSMUA_Achr6P32790_001 | Banana | cytosol | 72.63 | 61.61 |
| TraesCS1A01G297600.1 | Wheat | mitochondrion | 68.72 | 61.19 |
| GSMUA_AchrUn_... | Banana | plastid | 53.63 | 60.76 |
| GSMUA_Achr9P17980_001 | Banana | cytosol | 49.72 | 59.73 |
| TraesCS3A01G348400.1 | Wheat | plastid | 68.16 | 59.22 |
| Bra017125.1-P | Field mustard | plastid | 63.13 | 55.39 |
| CDY18391 | Canola | plastid | 63.13 | 55.39 |
| CDY54415 | Canola | cytosol | 63.13 | 55.39 |
| VIT_13s0067g01940.t01 | Wine grape | plastid | 65.36 | 55.19 |
| CDX91449 | Canola | plastid | 63.69 | 55.07 |
| Solyc05g052420.1.1 | Tomato | cytosol | 25.14 | 54.88 |
| AT2G38310.1 | Thale cress | plastid | 63.13 | 54.59 |
| CDY54453 | Canola | plastid | 63.13 | 54.33 |
| Solyc03g095780.1.1 | Tomato | plastid | 60.89 | 54.23 |
| GSMUA_Achr8P21220_001 | Banana | cytosol | 51.4 | 54.12 |
| CDY14471 | Canola | plastid | 62.57 | 54.11 |
| CDY07739 | Canola | plastid | 62.57 | 54.11 |
| Bra000052.1-P | Field mustard | plastid | 62.57 | 54.11 |
| PGSC0003DMT400053102 | Potato | cytosol, plastid | 60.34 | 53.73 |
| PGSC0003DMT400053120 | Potato | cytosol, plastid | 60.34 | 53.73 |
| PGSC0003DMT400053119 | Potato | cytosol, plastid | 60.34 | 53.73 |
| KRH76014 | Soybean | cytosol | 64.8 | 53.7 |
| KRH73249 | Soybean | plastid | 61.45 | 52.88 |
| Solyc10g085310.1.1 | Tomato | plastid | 62.57 | 52.58 |
| VIT_08s0058g00470.t01 | Wine grape | plastid | 66.48 | 52.42 |
| Solyc09g015380.1.1 | Tomato | plastid | 58.66 | 52.24 |
| CDX93191 | Canola | cytosol | 59.22 | 52.22 |
| CDY04951 | Canola | cytosol | 56.98 | 51.78 |
| CDY52923 | Canola | cytosol | 59.22 | 51.71 |
| Bra017012.1-P | Field mustard | cytosol | 59.22 | 51.71 |
| Bra005115.1-P | Field mustard | plastid | 43.02 | 51.68 |
| PGSC0003DMT400028658 | Potato | nucleus | 61.45 | 51.64 |
| TraesCS3A01G154400.1 | Wheat | cytosol | 56.42 | 51.27 |
| AT5G05440.1 | Thale cress | cytosol | 58.1 | 51.23 |
| PGSC0003DMT400041080 | Potato | mitochondrion | 59.22 | 51.21 |
| TraesCS7A01G358200.1 | Wheat | cytosol | 55.87 | 51.02 |
| Solyc10g076410.1.1 | Tomato | plastid | 57.54 | 50.74 |
| TraesCS2A01G089400.1 | Wheat | plastid | 81.01 | 50.7 |
| Bra009113.1-P | Field mustard | cytosol | 57.54 | 50.49 |
| CDX70150 | Canola | cytosol | 57.54 | 50.49 |
| CDX98844 | Canola | cytosol | 57.54 | 50.49 |
| KRH14908 | Soybean | plastid | 61.45 | 50.46 |
| PGSC0003DMT400061535 | Potato | plastid | 61.45 | 50.46 |
| PGSC0003DMT400075056 | Potato | plastid | 59.22 | 49.53 |
| PGSC0003DMT400069734 | Potato | mitochondrion, plastid | 57.54 | 49.52 |
| AT2G40330.1 | Thale cress | cytosol | 58.66 | 48.84 |
| Bra005853.1-P | Field mustard | cytosol | 55.31 | 48.77 |
| CDX80959 | Canola | cytosol | 55.31 | 48.77 |
| CDY72318 | Canola | cytosol | 55.31 | 48.77 |
| CDX74796 | Canola | cytosol, nucleus, plastid | 57.54 | 48.58 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 53.63 | 48.48 |
| CDY24911 | Canola | cytosol, mitochondrion | 57.54 | 48.36 |
| Bra000184.1-P | Field mustard | cytosol, mitochondrion | 56.98 | 48.11 |
| CDY07608 | Canola | cytosol, mitochondrion | 56.98 | 48.11 |
| Bra004967.1-P | Field mustard | mitochondrion | 56.42 | 47.64 |
| CDY18867 | Canola | cytosol, mitochondrion, nucleus, plastid | 55.87 | 47.17 |
| TraesCS1A01G191700.1 | Wheat | cytosol | 52.51 | 44.55 |
| TraesCS1A01G126800.1 | Wheat | cytosol | 47.49 | 41.46 |
| KRH31193 | Soybean | cytosol, golgi, plastid | 58.66 | 40.86 |
| Solyc06g050500.2.1 | Tomato | plastid | 62.57 | 40.73 |
| TraesCS7A01G350800.1 | Wheat | cytosol | 39.66 | 36.04 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G114400.1 | EnsemblPlantsGene:TraesCS4A01G114400 | Gene3D:3.30.530.20 | InterPro:IPR023393 | InterPro:Polyketide_cyclase/dehydratase | InterPro:START-like_dom_sf |
| PANTHER:PTHR31213 | PANTHER:PTHR31213:SF3 | PFAM:PF10604 | SEG:seg | SUPFAM:SSF55961 | TIGR:cd07821 |
| MapMan:11.1.2.1.1.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4A:-:138832497..138833036
Molecular Weight (calculated)
19178.7 Da
IEP (calculated)
6.781
GRAVY (calculated)
-0.054
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MRCREHDCEV PAEVARHHEH AEPGSGQCCS AVVQHVAAPA AAVWSVVRRF DQPQAYKRFV RSCALVAGDG GVGTLREVHV VSGLPAASSR ERLEILDDES
101: HVLSFRVVGG EHRLKNYLSV TTVHPSPAAP SSATVVVESY VVDVPAGNTT EDTRVFIDTI VKCNLQSLAK TAEKVAAVS
101: HVLSFRVVGG EHRLKNYLSV TTVHPSPAAP SSATVVVESY VVDVPAGNTT EDTRVFIDTI VKCNLQSLAK TAEKVAAVS
001: MMDGVEGGTA MYGGLETVQY VRTHHQHLCR ENQCTSALVK HIKAPLHLVW SLVRRFDQPQ KYKPFVSRCT VIGDPEIGSL REVNVKSGLP ATTSTERLEL
101: LDDEEHILGI KIIGGDHRLK NYSSILTVHP EIIEGRAGTM VIESFVVDVP QGNTKDETCY FVEALIRCNL KSLADVSERL ASQDITQ
101: LDDEEHILGI KIIGGDHRLK NYSSILTVHP EIIEGRAGTM VIESFVVDVP QGNTKDETCY FVEALIRCNL KSLADVSERL ASQDITQ
Arabidopsis Description
PYL9RCAR1 [Source:UniProtKB/TrEMBL;Acc:A0A178W4H4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.