Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G449700.1 | Wheat | cytosol | 97.33 | 97.8 |
| HORVU1Hr1G094840.9 | Barley | extracellular, mitochondrion | 93.2 | 91.87 |
| TraesCS1B01G475700.1 | Wheat | cytosol | 96.36 | 89.21 |
| Os05t0592800-02 | Rice | endoplasmic reticulum, vacuole | 74.76 | 69.21 |
| PGSC0003DMT400021210 | Potato | cytosol, nucleus, peroxisome | 15.05 | 68.89 |
| Zm00001d009747_P001 | Maize | cytosol | 70.39 | 68.56 |
| KXG22681 | Sorghum | cytosol | 71.12 | 68.46 |
| Solyc08g062640.2.1 | Tomato | cytosol | 21.84 | 67.16 |
| Zm00001d039163_P002 | Maize | cytosol | 69.42 | 66.67 |
| TraesCS3A01G209200.1 | Wheat | peroxisome, plasma membrane, vacuole | 69.66 | 59.92 |
| GSMUA_Achr7P24000_001 | Banana | cytosol | 55.1 | 57.91 |
| GSMUA_Achr8P05700_001 | Banana | cytosol, peroxisome, plasma membrane | 58.01 | 54.82 |
| TraesCS1A01G358600.1 | Wheat | cytosol | 48.06 | 52.11 |
| CDX96761 | Canola | cytosol | 42.72 | 50.29 |
| TraesCS3A01G249000.1 | Wheat | cytosol | 46.84 | 50.0 |
| CDX83901 | Canola | cytosol | 41.5 | 48.86 |
| Bra016595.1-P | Field mustard | cytosol | 48.06 | 48.29 |
| GSMUA_Achr3P26270_001 | Banana | cytosol, peroxisome, plastid | 56.55 | 46.98 |
| CDX72943 | Canola | cytosol, peroxisome, plastid | 50.73 | 44.0 |
| Solyc12g096020.1.1 | Tomato | cytosol, nucleus, plastid | 53.64 | 43.5 |
| Bra016034.1-P | Field mustard | cytosol, peroxisome, plastid | 50.73 | 43.18 |
| CDX96432 | Canola | cytosol, peroxisome, plastid | 50.73 | 43.18 |
| PGSC0003DMT400075333 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 54.37 | 41.79 |
| VIT_04s0008g01420.t01 | Wine grape | cytosol | 55.83 | 41.74 |
| CDY26234 | Canola | cytosol | 50.24 | 41.73 |
| AT1G72770.1 | Thale cress | cytosol | 51.46 | 41.49 |
| KRH61549 | Soybean | cytosol | 54.61 | 41.36 |
| KRH52222 | Soybean | cytosol | 54.37 | 41.18 |
| TraesCS5A01G183600.1 | Wheat | peroxisome | 34.47 | 40.69 |
| Bra025964.1-P | Field mustard | cytosol | 50.0 | 40.55 |
| CDY48313 | Canola | cytosol | 49.27 | 40.52 |
| VIT_09s0002g01850.t01 | Wine grape | cytosol, peroxisome, plastid | 53.88 | 40.51 |
| KRH05300 | Soybean | cytosol | 54.37 | 40.14 |
| KRH15739 | Soybean | cytosol | 54.13 | 40.04 |
| PGSC0003DMT400006608 | Potato | plastid | 52.91 | 40.0 |
| AT1G17550.1 | Thale cress | cytosol | 49.51 | 39.92 |
| TraesCS3A01G237800.1 | Wheat | plastid | 38.11 | 39.85 |
| TraesCS1A01G411200.1 | Wheat | nucleus | 35.19 | 37.96 |
| TraesCS7A01G047900.1 | Wheat | cytosol, mitochondrion, peroxisome | 9.95 | 36.94 |
| TraesCS3A01G362200.1 | Wheat | nucleus, plastid | 34.71 | 36.57 |
| Solyc08g062650.2.1 | Tomato | extracellular | 39.56 | 34.75 |
| TraesCS4A01G094300.1 | Wheat | nucleus | 34.22 | 34.47 |
| TraesCS4A01G443400.1 | Wheat | mitochondrion | 28.16 | 31.61 |
| TraesCS4A01G443500.1 | Wheat | mitochondrion | 28.16 | 31.61 |
| TraesCS7A01G048200.1 | Wheat | plastid | 27.91 | 31.42 |
| TraesCS2A01G000400.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 31.31 | 29.66 |
| TraesCS3A01G144400.1 | Wheat | peroxisome | 19.17 | 25.82 |
| TraesCS7A01G395000.1 | Wheat | plasma membrane, vacuole | 24.76 | 9.56 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:11.1.2.1.1.2 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0006950 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009414 |
| GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009788 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0043169 | GO:GO:0048364 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 | InterPro:PP2C |
| InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 | PFscan:PS51746 | PANTHER:PTHR13832 |
| PANTHER:PTHR13832:SF312 | SMART:SM00332 | SUPFAM:SSF81606 | EnsemblPlantsGene:TraesCS1A01G441200 | EnsemblPlants:TraesCS1A01G441200.1 | TIGR:cd00143 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1A:+:589820566..589822438
Molecular Weight (calculated)
43474.1 Da
IEP (calculated)
4.840
GRAVY (calculated)
-0.131
Length
412 amino acids
Sequence
(BLAST)
(BLAST)
001: MDALGAALPR LALADADADA GPDDACGSPC SVASDCSSVA SADFEGLFSP SGADAGPPSL LSDDLPAAAA EAATVPGGAC RSVFALDSPP LWGLESVCGR
101: RPEMEDAAAV APRFYRVPLW MVAGDGAAVD GLDRASFRLP AHFFAVYDGH GGAQVADYCR DKLHATLVEE LRAAEDRVGG CDDLSSLDSK KQWEKAFVDC
201: FCRVDAEVEA PDSAGSTAVA AVVCSSHIIV SNCGDSRAVL CRGKAPLPLS LDHKPNREDE YARIEALGGK VIQWNGYRVL GVLAMSRSIG DRYLKPYIIP
301: VPEVTVVARA REDECLILAS DGLWDVLSNE EVCDAARKRI LLWHKKNATA SSSISRGRSG GDGGSPDPAA QAAAEYLSKL ALQKGSKDNI TVLVVDLKAH
401: RKFRSKTDNN NR
101: RPEMEDAAAV APRFYRVPLW MVAGDGAAVD GLDRASFRLP AHFFAVYDGH GGAQVADYCR DKLHATLVEE LRAAEDRVGG CDDLSSLDSK KQWEKAFVDC
201: FCRVDAEVEA PDSAGSTAVA AVVCSSHIIV SNCGDSRAVL CRGKAPLPLS LDHKPNREDE YARIEALGGK VIQWNGYRVL GVLAMSRSIG DRYLKPYIIP
301: VPEVTVVARA REDECLILAS DGLWDVLSNE EVCDAARKRI LLWHKKNATA SSSISRGRSG GDGGSPDPAA QAAAEYLSKL ALQKGSKDNI TVLVVDLKAH
401: RKFRSKTDNN NR
001: MEEMTPAVAM TLSLAANTMC ESSPVEITQL KNVTDAADLL SDSENQSFCN GGTECTMEDV SELEEVGEQD LLKTLSDTRS GSSNVFDEDD VLSVVEDNSA
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GDRYLKPYVI PEPEVTFMPR SREDECLILA SDGLWDVMNN QEVCEIARRR ILMWHKKNGA PPLAERGKGI DPACQAAADY LSMLALQKGS KDNISIIVID
501: LKAQRKFKTR T
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GDRYLKPYVI PEPEVTFMPR SREDECLILA SDGLWDVMNN QEVCEIARRR ILMWHKKNGA PPLAERGKGI DPACQAAADY LSMLALQKGS KDNISIIVID
501: LKAQRKFKTR T
Arabidopsis Description
HAB1Protein phosphatase 2C 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.