Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G017000.2 | Wheat | cytosol, plastid | 92.55 | 99.4 |
| TraesCS4A01G294800.1 | Wheat | cytosol, plastid | 92.36 | 99.2 |
| HORVU4Hr1G002870.1 | Barley | cytosol | 79.14 | 96.59 |
| KXG37877 | Sorghum | cytosol | 84.17 | 90.4 |
| Os03t0666200-01 | Rice | plasma membrane | 83.99 | 90.2 |
| Zm00001d013589_P006 | Maize | cytosol, plastid | 83.24 | 89.4 |
| Zm00001d034954_P001 | Maize | extracellular | 83.99 | 78.71 |
| Os12t0505950-00 | Rice | cytosol | 10.99 | 73.75 |
| Os05t0128700-00 | Rice | cytosol | 10.99 | 73.75 |
| GSMUA_Achr5P02150_001 | Banana | cytosol, plastid | 66.29 | 71.49 |
| Os05t0153901-00 | Rice | cytosol | 10.43 | 70.0 |
| VIT_12s0028g00830.t01 | Wine grape | cytosol | 64.8 | 69.6 |
| GSMUA_Achr9P10020_001 | Banana | cytosol | 62.57 | 67.88 |
| KRH73621 | Soybean | endoplasmic reticulum | 60.52 | 66.33 |
| KRH14510 | Soybean | cytosol | 59.96 | 65.71 |
| TraesCS2B01G267300.1 | Wheat | cytosol | 56.8 | 63.94 |
| CDX97786 | Canola | cytosol, plastid | 57.36 | 61.48 |
| CDY29635 | Canola | cytosol, plastid | 57.17 | 61.03 |
| Bra021674.1-P | Field mustard | cytosol | 57.17 | 61.03 |
| Solyc05g021100.2.1 | Tomato | cytosol, nucleus, plastid | 49.72 | 60.82 |
| AT2G30880.1 | Thale cress | cytosol, plastid | 56.98 | 60.71 |
| Bra022817.1-P | Field mustard | cytosol | 26.82 | 51.61 |
| CDY23978 | Canola | cytosol | 38.36 | 44.21 |
| Zm00001d033157_P001 | Maize | mitochondrion | 7.45 | 25.48 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G018800.2 | EnsemblPlantsGene:TraesCS4B01G018800 | Gene3D:2.30.29.30 | InterPro:IPR001849 | InterPro:IPR011993 | InterPro:PH-like_dom_sf |
| InterPro:PH_domain | ncoils:Coil | PANTHER:PTHR24356 | PANTHER:PTHR24356:SF215 | PFAM:PF00169 | PFscan:PS50003 |
| SEG:seg | SMART:SM00233 | SUPFAM:SSF50729 | TIGR:cd00821 | MapMan:27.4.3.3 | : |
Description
No Description!
Coordinates
chr4B:-:13422344..13426147
Molecular Weight (calculated)
58628.2 Da
IEP (calculated)
4.988
GRAVY (calculated)
-0.449
Length
537 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTNGSSPVR APPSRPGPHA SEISRLWLVS VFSDDLLGRG WGILQRVRDT ESSLEKVKRQ LSTGSGRYLL QGPLLKRSET LRKWNERWII LDPTSGKMEY
101: KLRRNETAVK GTIIFDASST ITLSPVNFQG MPKYDGCCFY IGTPQKKDYF LCAETPGAAK AWVSTLHATQ LVLQAHKEAV NSLAGNGSPS TLGTVATAVA
201: NANATALEAM KEIDAALKVS MRAALGLGTN NSNVGQLDDL TIMKETLRVK DEELQHLAKD IRARDATIQE IAEKLTETAE AAEAAASAAH TIDEQRRLLC
301: SEIERLKKAM ETQMEQSMLK LRQSEEKVIS LSKENDQLMK ERDAAFQEAY MWRTELGKAR EQAVIQEAAI ARAEEKVRVS EADAAVRIKE AAEKLHAAEK
401: EKEELLALIG VLQSQVQREQ SSTKQVCEER SESCSGADNS PPLTKHVDAS DDDVDKACVS DSRSVVVSSE STEVQLAVDG VDIRPIGDPE WGSFQQPEAL
501: IADVREVSPE AEGSSLDIPV VNPAPANDHM QGGATHP
101: KLRRNETAVK GTIIFDASST ITLSPVNFQG MPKYDGCCFY IGTPQKKDYF LCAETPGAAK AWVSTLHATQ LVLQAHKEAV NSLAGNGSPS TLGTVATAVA
201: NANATALEAM KEIDAALKVS MRAALGLGTN NSNVGQLDDL TIMKETLRVK DEELQHLAKD IRARDATIQE IAEKLTETAE AAEAAASAAH TIDEQRRLLC
301: SEIERLKKAM ETQMEQSMLK LRQSEEKVIS LSKENDQLMK ERDAAFQEAY MWRTELGKAR EQAVIQEAAI ARAEEKVRVS EADAAVRIKE AAEKLHAAEK
401: EKEELLALIG VLQSQVQREQ SSTKQVCEER SESCSGADNS PPLTKHVDAS DDDVDKACVS DSRSVVVSSE STEVQLAVDG VDIRPIGDPE WGSFQQPEAL
501: IADVREVSPE AEGSSLDIPV VNPAPANDHM QGGATHP
001: MASNGASPRI VDATENSLDK IKRQLASGSG RNLLQGPLFK RSETLRKWNE RWVILDPTTG KMEYKTRRNE PTIKGTILFD ENSTISISPV NFQGLPKYNG
101: CCIYIGTPQK KDYFLCAETP GAAKAWVTTL HATQLVLKAH KEAVESLSGS GSATLGTVAT VVAAANSTAL ECSREIQAAM QISLRNALKI TPNKPIDGPL
201: DDLTIMKETL RVKDEELHNL ARELRSRDSM IKEIADKLSE TAEAAVAAAS AAHTMDEQRK IVCVEFERLT TDSQRQQEAT KLKLKELEEK TFTLSKEKDQ
301: LVKERDAALQ EAHMWRSELG KARERVVILE GAVVRAEEKV RVAEASGEAK SKEASQREAT AWTEKQELLA YVNMLQTQLQ RQQLETKQVC EEKTESTNGE
401: ASLPMTKETE KNVDKACLSI SRTASIPGEN VVHMSEEQVV NAQPPVGENE WNDIQATEAR VSDVREISAE TERDRRNSLD IPVVSPEPNV PRNDPPSESF
501: HHQP
101: CCIYIGTPQK KDYFLCAETP GAAKAWVTTL HATQLVLKAH KEAVESLSGS GSATLGTVAT VVAAANSTAL ECSREIQAAM QISLRNALKI TPNKPIDGPL
201: DDLTIMKETL RVKDEELHNL ARELRSRDSM IKEIADKLSE TAEAAVAAAS AAHTMDEQRK IVCVEFERLT TDSQRQQEAT KLKLKELEEK TFTLSKEKDQ
301: LVKERDAALQ EAHMWRSELG KARERVVILE GAVVRAEEKV RVAEASGEAK SKEASQREAT AWTEKQELLA YVNMLQTQLQ RQQLETKQVC EEKTESTNGE
401: ASLPMTKETE KNVDKACLSI SRTASIPGEN VVHMSEEQVV NAQPPVGENE WNDIQATEAR VSDVREISAE TERDRRNSLD IPVVSPEPNV PRNDPPSESF
501: HHQP
Arabidopsis Description
At2g30880/F7F1.9 [Source:UniProtKB/TrEMBL;Acc:Q8VYJ6]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.