Factsheet for GSMUA_Achr9P10020_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr3P10010_001
GSMUA_Achr4P18240_001
GSMUA_Achr4P18690_001
GSMUA_Achr5P03960_001
GSMUA_Achr5P07440_001
GSMUA_Achr5P14320_001
GSMUA_Achr5P14630_001
GSMUA_Achr5P18540_001
GSMUA_Achr6P33560_001
GSMUA_Achr7P09070_001
GSMUA_Achr7P22310_001
GSMUA_Achr8P02250_001
GSMUA_Achr8P05370_001
GSMUA_Achr8P18930_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30880.1	GSMUA_Achr7P09070_001	AT1G55190.1	21798944
AT2G30880.1	GSMUA_Achr10P...	AT3G54120.1	21798944
AT2G30880.1	GSMUA_Achr6P33560_001	AT3G54120.1	21798944
AT2G30880.1	GSMUA_Achr8P02250_001	AT3G54120.1	21798944
AT2G30880.1	GSMUA_Achr8P05370_001	AT4G00980.1	21798944
AT2G30880.1	GSMUA_Achr11P...	AT4G30080.1	21798944
AT2G30880.1	GSMUA_Achr11P...	AT4G30080.1	21798944
AT2G30880.1	GSMUA_Achr4P18240_001	AT4G30080.1	21798944
AT2G30880.1	GSMUA_Achr5P03960_001	AT4G30080.1	21798944
AT2G30880.1	GSMUA_Achr5P14630_001	AT4G30080.1	21798944
AT2G30880.1	GSMUA_Achr5P18540_001	AT4G30080.1	21798944
AT2G30880.1	GSMUA_Achr8P18930_001	AT4G30080.1	21798944
AT2G30880.1	GSMUA_Achr10P...	AT5G01640.1	21798944
AT2G30880.1	GSMUA_Achr3P10010_001	AT5G01640.1	21798944
AT2G30880.1	GSMUA_Achr4P18690_001	AT5G01640.1	21798944
AT2G30880.1	GSMUA_Achr5P07440_001	AT5G01640.1	21798944
AT2G30880.1	GSMUA_Achr5P14320_001	AT5G01640.1	21798944
AT2G30880.1	GSMUA_Achr7P22310_001	AT5G01640.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P02150_001	Banana	cytosol, plastid	77.37	76.91
KXG37877	Sorghum	cytosol	70.1	69.4
Zm00001d013589_P006	Maize	cytosol, plastid	69.09	68.4
Os03t0666200-01	Rice	plasma membrane	68.48	67.8
TraesCS4D01G017000.2	Wheat	cytosol, plastid	68.28	67.6
TraesCS4A01G294800.1	Wheat	cytosol, plastid	67.88	67.2
VIT_12s0028g00830.t01	Wine grape	cytosol	67.27	66.6
HORVU4Hr1G002870.1	Barley	cytosol	59.19	66.59
KRH73621	Soybean	endoplasmic reticulum	64.44	65.1
KRH14510	Soybean	cytosol	64.24	64.9
TraesCS2A01G254800.2	Wheat	cytosol	62.02	63.17
TraesCS2D01G255300.2	Wheat	cytosol	61.82	62.96
TraesCS2B01G267300.1	Wheat	cytosol	60.4	62.68
TraesCS4B01G018800.2	Wheat	cytosol, plastid	67.88	62.57
Os07t0138100-01	Rice	cytosol	60.81	62.19
Solyc05g021100.2.1	Tomato	cytosol, nucleus, plastid	54.55	61.5
Zm00001d007849_P002	Maize	cytosol, plastid	58.38	61.1
Zm00001d018772_P001	Maize	peroxisome	11.72	59.79
Zm00001d034954_P001	Maize	extracellular	68.48	59.16
AT2G30880.1	Thale cress	cytosol, plastid	59.8	58.73
CDX97786	Canola	cytosol, plastid	58.79	58.08
Bra021674.1-P	Field mustard	cytosol	58.79	57.85
CDY29635	Canola	cytosol, plastid	58.79	57.85
HORVU2Hr1G060900.13	Barley	plastid	56.77	57.11
KXG34371	Sorghum	mitochondrion	58.38	57.0
Os12t0505950-00	Rice	cytosol	8.28	51.25
Os05t0128700-00	Rice	cytosol	8.28	51.25
Bra022817.1-P	Field mustard	cytosol	28.48	50.54
Os05t0153901-00	Rice	cytosol	7.88	48.75
CDY23978	Canola	cytosol	40.4	42.92
GSMUA_Achr4P32020_001	Banana	cytosol	4.85	24.49
Zm00001d033157_P001	Maize	mitochondrion	7.07	22.29

Protein Annotations

EnsemblPlants:GSMUA_Achr9P10020_001	EnsemblPlants:GSMUA_Achr9T10020_001	EnsemblPlantsGene:GSMUA_Achr9G10020_001	Gene3D:2.30.29.30	InterPro:IPR001849	InterPro:IPR011993
InterPro:PH-like_dom_sf	InterPro:PH_domain	ncoils:Coil	PANTHER:PTHR24356	PANTHER:PTHR24356:SF215	PFAM:PF00169
PFscan:PS50003	SEG:seg	SMART:SM00233	SUPFAM:SSF50729	UniParc:UPI000295AECC	UniProt:M0TZ11
MapMan:27.4.3.3	:	:	:	:	:

Description

pleckstrin homology domain-containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G10020_001]

Coordinates

chr9:+:6447346..6452742

Molecular Weight (calculated)

54336.4 Da

IEP (calculated)

4.967

GRAVY (calculated)

-0.358

Length

495 amino acids

Sequence
(BLAST)

001: MASNGSAART GDVESSLEKI KRQLMSGSGK YLLQGPLLKR SETLRKWNER WVILDPTTGK MEYKLRRNDT IIKGAIIFDS NSIITISPIN LHGLQKYDGC
101: CFYIGTPQKK EYFLCAETPG AAKAWVATLH ATQLVLHAHK EAVTNLSGSG SVKLGTIATV VATANSTAME ASKEIEAAMR ISMKAALGLL TNKANEGQLD
201: DLTIMKETIR VKDEELQQLA KDICARDSTI KDIADKLMET AEAAEAAASA AHAIDGERRI ACLEIEHLTY DAQKQLETAQ LKLREYEEKV MALATERELL
301: LKQRDSAFQE AHQWRSELAK AREHAVILEA AVFRAEERAR ALEVDAGARV NDAVEKALTA AKEKEDLLAL VNVLQTQVQR QQSNTKQVCE ERSEARSTTD
401: VTTKHVDLSE DDVDKACLSD PRVLLDSADT EVQLGVDGVE ICSIGDAEWG NFQSTAARIA DVREISLESE ESSLDIPVVG TPIDDHQHGG RSLQP

Best Arabidopsis Sequence Match ( AT2G30880.1 )
(BLAST)

001: MASNGASPRI VDATENSLDK IKRQLASGSG RNLLQGPLFK RSETLRKWNE RWVILDPTTG KMEYKTRRNE PTIKGTILFD ENSTISISPV NFQGLPKYNG
101: CCIYIGTPQK KDYFLCAETP GAAKAWVTTL HATQLVLKAH KEAVESLSGS GSATLGTVAT VVAAANSTAL ECSREIQAAM QISLRNALKI TPNKPIDGPL
201: DDLTIMKETL RVKDEELHNL ARELRSRDSM IKEIADKLSE TAEAAVAAAS AAHTMDEQRK IVCVEFERLT TDSQRQQEAT KLKLKELEEK TFTLSKEKDQ
301: LVKERDAALQ EAHMWRSELG KARERVVILE GAVVRAEEKV RVAEASGEAK SKEASQREAT AWTEKQELLA YVNMLQTQLQ RQQLETKQVC EEKTESTNGE
401: ASLPMTKETE KNVDKACLSI SRTASIPGEN VVHMSEEQVV NAQPPVGENE WNDIQATEAR VSDVREISAE TERDRRNSLD IPVVSPEPNV PRNDPPSESF
501: HHQP

Arabidopsis Description

At2g30880/F7F1.9 [Source:UniProtKB/TrEMBL;Acc:Q8VYJ6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.