Factsheet for HORVU2Hr1G060900.13

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G028520.1
HORVU1Hr1G041770.1
HORVU1Hr1G070360.1
HORVU2Hr1G086930.1
HORVU2Hr1G089660.8
HORVU2Hr1G089670.1
HORVU3Hr1G018940.2
HORVU3Hr1G066410.6
HORVU3Hr1G081710.1
HORVU3Hr1G088130.1
HORVU4Hr1G024530.1
HORVU4Hr1G078490.1
HORVU5Hr1G024100.1
HORVU5Hr1G047520.1
HORVU6Hr1G058890.2
HORVU7Hr1G021880.1
HORVU7Hr1G101270.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30880.1	HORVU1Hr1G028520.1	AT1G55190.1	21798944
AT2G30880.1	HORVU3Hr1G018940.2	AT1G55190.1	21798944
AT2G30880.1	HORVU3Hr1G066410.6	AT4G00980.1	21798944
AT2G30880.1	HORVU1Hr1G041770.1	AT4G30080.1	21798944
AT2G30880.1	HORVU2Hr1G089660.8	AT4G30080.1	21798944
AT2G30880.1	HORVU2Hr1G089670.1	AT4G30080.1	21798944
AT2G30880.1	HORVU3Hr1G081710.1	AT4G30080.1	21798944
AT2G30880.1	HORVU4Hr1G078490.1	AT4G30080.1	21798944
AT2G30880.1	HORVU5Hr1G024100.1	AT4G30080.1	21798944
AT2G30880.1	HORVU6Hr1G058890.2	AT4G30080.1	21798944
AT2G30880.1	HORVU7Hr1G021880.1	AT4G30080.1	21798944
AT2G30880.1	HORVU7Hr1G101270.1	AT4G30080.1	21798944
AT2G30880.1	HORVU1Hr1G070360.1	AT5G01640.1	21798944
AT2G30880.1	HORVU2Hr1G086930.1	AT5G01640.1	21798944
AT2G30880.1	HORVU3Hr1G088130.1	AT5G01640.1	21798944
AT2G30880.1	HORVU4Hr1G024530.1	AT5G01640.1	21798944
AT2G30880.1	HORVU5Hr1G047520.1	AT5G01640.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G255300.2	Wheat	cytosol	87.4	88.48
TraesCS2A01G254800.2	Wheat	cytosol	87.4	88.48
TraesCS2B01G267300.1	Wheat	cytosol	85.77	88.47
Os07t0138100-01	Rice	cytosol	78.86	80.17
Zm00001d007849_P002	Maize	cytosol, plastid	73.98	76.96
KXG34371	Sorghum	mitochondrion	76.22	73.96
HORVU4Hr1G002870.1	Barley	cytosol	52.64	58.86
GSMUA_Achr9P10020_001	Banana	cytosol	57.11	56.77
GSMUA_Achr5P02150_001	Banana	cytosol, plastid	57.11	56.43
KRH14510	Soybean	cytosol	55.08	55.31
KRH73621	Soybean	endoplasmic reticulum	55.08	55.31
VIT_12s0028g00830.t01	Wine grape	cytosol	55.69	54.8
Zm00001d018772_P001	Maize	peroxisome	10.57	53.61
Solyc05g021100.2.1	Tomato	cytosol, nucleus, plastid	46.14	51.71
AT2G30880.1	Thale cress	cytosol, plastid	52.03	50.79
CDX97786	Canola	cytosol, plastid	51.42	50.5
CDY29635	Canola	cytosol, plastid	51.63	50.5
Bra021674.1-P	Field mustard	cytosol	51.63	50.5
Bra022817.1-P	Field mustard	cytosol	24.39	43.01
CDY23978	Canola	cytosol	36.79	38.84

Protein Annotations

EnsemblPlants:HORVU2Hr1G060900.13	EnsemblPlantsGene:HORVU2Hr1G060900	Gene3D:2.30.29.30	InterPro:IPR001849	InterPro:IPR011993	InterPro:PH-like_dom_sf
InterPro:PH_domain	ncoils:Coil	PANTHER:PTHR24356	PANTHER:PTHR24356:SF215	PFAM:PF00169	PFscan:PS50003
SEG:seg	SMART:SM00233	SUPFAM:SSF50729	UniParc:UPI000B462804	UniProt:A0A287I5Q7	MapMan:27.4.3.3

Description

No Description!

Coordinates

chrchr2H:-:407310757..407321226

Molecular Weight (calculated)

54487.9 Da

IEP (calculated)

4.764

GRAVY (calculated)

-0.467

Length

492 amino acids

Sequence
(BLAST)

001: EKLLVSFGVT SSRVYRSSFF RASFVRSSLD PPPHPSISAM ASNANGRSTM VGEMESSLER VRRQLSSTST RHILQGPLLK RSDTLRKWNE RWVILDPATG
101: KMEYKVRRSD TTVRGIIVFD STSTVTLSPT NFHGVPKYEG CCVYIGTPQK KEYFLCAETP SAARAWVSTL HATQLVLQAH KQAVDSLGGN GSSKLGTVAT
201: VVAVANATAI EASKEETLRV KDDELHQLLQ DIRARDSTIR EITDKLQETA EAAETAASAA HAIDEARRFL SSELECLKQD QENQVELSLL RLRESEEKAK
301: LLAEEREHLL KERDSALQEA QMWRFELGKA RGNAVILEAA VVRAEEKARV SAADADMRIK EAVSKLDSAA KEKQELLALV DALQSQIQRQ EASTKLICEE
401: RSELCSSSKH MDMDNDNVDK ACLSDTDLIP VAENIVELDD EGVDIRTIGD TEWENPHSSE VSDVREVSTE AEENSLDIPV DSQPVAEDTF QG

Best Arabidopsis Sequence Match ( AT2G30880.1 )
(BLAST)

001: MASNGASPRI VDATENSLDK IKRQLASGSG RNLLQGPLFK RSETLRKWNE RWVILDPTTG KMEYKTRRNE PTIKGTILFD ENSTISISPV NFQGLPKYNG
101: CCIYIGTPQK KDYFLCAETP GAAKAWVTTL HATQLVLKAH KEAVESLSGS GSATLGTVAT VVAAANSTAL ECSREIQAAM QISLRNALKI TPNKPIDGPL
201: DDLTIMKETL RVKDEELHNL ARELRSRDSM IKEIADKLSE TAEAAVAAAS AAHTMDEQRK IVCVEFERLT TDSQRQQEAT KLKLKELEEK TFTLSKEKDQ
301: LVKERDAALQ EAHMWRSELG KARERVVILE GAVVRAEEKV RVAEASGEAK SKEASQREAT AWTEKQELLA YVNMLQTQLQ RQQLETKQVC EEKTESTNGE
401: ASLPMTKETE KNVDKACLSI SRTASIPGEN VVHMSEEQVV NAQPPVGENE WNDIQATEAR VSDVREISAE TERDRRNSLD IPVVSPEPNV PRNDPPSESF
501: HHQP

Arabidopsis Description

At2g30880/F7F1.9 [Source:UniProtKB/TrEMBL;Acc:Q8VYJ6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.