Factsheet for AT2G30880.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97786	Canola	cytosol, plastid	88.69	89.22
CDY29635	Canola	cytosol, plastid	88.1	88.27
Bra021674.1-P	Field mustard	cytosol	88.1	88.27
Bra022817.1-P	Field mustard	cytosol	45.83	82.8
KRH14510	Soybean	cytosol	69.44	71.43
KRH73621	Soybean	endoplasmic reticulum	69.44	71.43
VIT_12s0028g00830.t01	Wine grape	cytosol	70.83	71.4
CDY23978	Canola	cytosol	63.69	68.88
Solyc05g021100.2.1	Tomato	cytosol, nucleus, plastid	58.13	66.74
KXG37877	Sorghum	cytosol	62.9	63.4
GSMUA_Achr5P02150_001	Banana	cytosol, plastid	62.5	63.25
Os03t0666200-01	Rice	plasma membrane	62.5	63.0
Zm00001d013589_P006	Maize	cytosol, plastid	61.31	61.8
TraesCS4A01G294800.1	Wheat	cytosol, plastid	60.91	61.4
TraesCS4D01G017000.2	Wheat	cytosol, plastid	60.71	61.2
GSMUA_Achr9P10020_001	Banana	cytosol	58.73	59.8
HORVU4Hr1G002870.1	Barley	cytosol	51.59	59.09
Os05t0128700-00	Rice	cytosol	9.33	58.75
Os12t0505950-00	Rice	cytosol	9.33	58.75
Zm00001d007849_P002	Maize	cytosol, plastid	54.37	57.93
Zm00001d018772_P001	Maize	peroxisome	11.11	57.73
TraesCS2D01G255300.2	Wheat	cytosol	55.36	57.41
TraesCS2A01G254800.2	Wheat	cytosol	55.16	57.2
TraesCS4B01G018800.2	Wheat	cytosol, plastid	60.71	56.98
Os07t0138100-01	Rice	cytosol	54.56	56.82
TraesCS2B01G267300.1	Wheat	cytosol	53.77	56.81
Os05t0153901-00	Rice	cytosol	8.73	55.0
Zm00001d034954_P001	Maize	extracellular	62.3	54.8
KXG34371	Sorghum	mitochondrion	54.56	54.24
HORVU2Hr1G060900.13	Barley	plastid	50.79	52.03
Zm00001d033157_P001	Maize	mitochondrion	5.75	18.47

Protein Annotations

Gene3D:2.30.29.30	MapMan:27.4.3.3	EntrezGene:817638	UniProt:A0A178VTA4	ProteinID:AEC08451.1	ArrayExpress:AT2G30880
EnsemblPlantsGene:AT2G30880	RefSeq:AT2G30880	TAIR:AT2G30880	RefSeq:AT2G30880-TAIR-G	EnsemblPlants:AT2G30880.1	TAIR:AT2G30880.1
EMBL:AY070724	EMBL:AY143965	Unigene:At.71016	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0004674	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009505
GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0018105
GO:GO:0019538	GO:GO:0030312	GO:GO:0035556	GO:GO:0042742	InterPro:IPR001849	InterPro:IPR011993
RefSeq:NP_850155.1	ProteinID:OAP08395.1	PFAM:PF00169	InterPro:PH-like_dom_sf	InterPro:PH_domain	PO:PO:0000293
PO:PO:0009047	PFscan:PS50003	PANTHER:PTHR24356	PANTHER:PTHR24356:SF306	UniProt:Q8VYJ6	SMART:SM00233
SUPFAM:SSF50729	UniParc:UPI00000AC5D8	SEG:seg	:	:	:

Description

At2g30880/F7F1.9 [Source:UniProtKB/TrEMBL;Acc:Q8VYJ6]

Coordinates

chr2:-:13142665..13146060

Molecular Weight (calculated)

56026.2 Da

IEP (calculated)

5.640

GRAVY (calculated)

-0.623

Length

504 amino acids

Sequence
(BLAST)

001: MASNGASPRI VDATENSLDK IKRQLASGSG RNLLQGPLFK RSETLRKWNE RWVILDPTTG KMEYKTRRNE PTIKGTILFD ENSTISISPV NFQGLPKYNG
101: CCIYIGTPQK KDYFLCAETP GAAKAWVTTL HATQLVLKAH KEAVESLSGS GSATLGTVAT VVAAANSTAL ECSREIQAAM QISLRNALKI TPNKPIDGPL
201: DDLTIMKETL RVKDEELHNL ARELRSRDSM IKEIADKLSE TAEAAVAAAS AAHTMDEQRK IVCVEFERLT TDSQRQQEAT KLKLKELEEK TFTLSKEKDQ
301: LVKERDAALQ EAHMWRSELG KARERVVILE GAVVRAEEKV RVAEASGEAK SKEASQREAT AWTEKQELLA YVNMLQTQLQ RQQLETKQVC EEKTESTNGE
401: ASLPMTKETE KNVDKACLSI SRTASIPGEN VVHMSEEQVV NAQPPVGENE WNDIQATEAR VSDVREISAE TERDRRNSLD IPVVSPEPNV PRNDPPSESF
501: HHQP

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.