Factsheet for Os03t0666200-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0196500-01
Os01t0706000-01
Os01t0827400-01
Os01t0851300-01
Os02t0628600-01
Os04t0367400-02
Os04t0519700-01
Os05t0200280-01
Os05t0474400-01
Os06t0685700-01
Os10t0479900-01
Os11t0107600-01
Os12t0107600-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30880.1	Os01t0196500-01	AT1G55190.1	21798944
AT2G30880.1	Os05t0200280-01	AT1G55190.1	21798944
AT2G30880.1	Os01t0851300-01	AT3G54120.1	21798944
AT2G30880.1	Os04t0367400-02	AT3G54120.1	21798944
AT2G30880.1	Os01t0706000-01	AT4G00980.1	21798944
AT2G30880.1	Os02t0628600-01	AT4G30080.1	21798944
AT2G30880.1	Os04t0519700-01	AT4G30080.1	21798944
AT2G30880.1	Os06t0685700-01	AT4G30080.1	21798944
AT2G30880.1	Os10t0479900-01	AT4G30080.1	21798944
AT2G30880.1	Os01t0827400-01	AT5G01640.1	21798944
AT2G30880.1	Os05t0474400-01	AT5G01640.1	21798944
AT2G30880.1	Os11t0107600-01	AT5G01640.1	21798944
AT2G30880.1	Os12t0107600-00	AT5G01640.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37877	Sorghum	cytosol	92.0	92.0
TraesCS4D01G017000.2	Wheat	cytosol, plastid	90.4	90.4
Zm00001d013589_P006	Maize	cytosol, plastid	90.2	90.2
TraesCS4A01G294800.1	Wheat	cytosol, plastid	90.2	90.2
HORVU4Hr1G002870.1	Barley	cytosol	78.4	89.09
TraesCS4B01G018800.2	Wheat	cytosol, plastid	90.2	83.99
Os12t0505950-00	Rice	cytosol	13.0	81.25
Os05t0128700-00	Rice	cytosol	13.0	81.25
Zm00001d034954_P001	Maize	extracellular	91.2	79.58
Os05t0153901-00	Rice	cytosol	12.4	77.5
GSMUA_Achr5P02150_001	Banana	cytosol, plastid	72.4	72.69
VIT_12s0028g00830.t01	Wine grape	cytosol	70.2	70.2
GSMUA_Achr9P10020_001	Banana	cytosol	67.8	68.48
KRH73621	Soybean	endoplasmic reticulum	65.0	66.33
KRH14510	Soybean	cytosol	64.6	65.92
Os07t0138100-01	Rice	cytosol	62.8	64.88
AT2G30880.1	Thale cress	cytosol, plastid	63.0	62.5
CDX97786	Canola	cytosol, plastid	62.6	62.48
CDY29635	Canola	cytosol, plastid	62.4	62.03
Bra021674.1-P	Field mustard	cytosol	62.4	62.03
Solyc05g021100.2.1	Tomato	cytosol, nucleus, plastid	54.4	61.96
Bra022817.1-P	Field mustard	cytosol	29.4	52.69
CDY23978	Canola	cytosol	42.2	45.28
Zm00001d033157_P001	Maize	mitochondrion	7.8	24.84

Protein Annotations

Gene3D:2.30.29.30	MapMan:27.4.3.3	EntrezGene:4333661	ProteinID:AAR87174.1	ProteinID:ABF98067.1	ProteinID:BAF12759.1
ProteinID:BAS85638.1	ncoils:Coil	ProteinID:EEE59643.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003824
GO:GO:0004357	GO:GO:0004674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006464	GO:GO:0006750	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0018105
GO:GO:0019538	GO:GO:0035556	GO:GO:0042398	InterPro:IPR001849	InterPro:IPR011993	EnsemblPlantsGene:Os03g0666200
EnsemblPlants:Os03t0666200-01	InterPro:PH-like_dom_sf	InterPro:PH_domain	PFscan:PS50003	PANTHER:PTHR24356	PANTHER:PTHR24356:SF215
UniProt:Q75H96	SMART:SM00233	SUPFAM:SSF50729	UniParc:UPI000022DFDA	RefSeq:XP_015630802.1	SEG:seg

Description

OsSWAP70ARac/Rop guanine nucleotide exchange factor, Regulation of immune responses (Os03t0666200-01)

Coordinates

chr3:-:26207742..26211666

Molecular Weight (calculated)

54563.4 Da

IEP (calculated)

4.976

GRAVY (calculated)

-0.511

Length

500 amino acids

Sequence
(BLAST)

001: MATNGSSPRA RETESSLEKV KRQLSSGSGR YLLQGPLLKR SETLRKWNER WVILDPTSGK MEYKIRRNET AIKGTIIFDA SSTITLSPVN FQGMPKYDGC
101: CFYIGTPQKK DYFLCAETPG AAKAWVSTLL ATQLVLQAHK EAVNSLAGNG SPATLGTVAT AVANANATAL EATKEIEAAM KVSMRAALGL GANNPKEGQL
201: DDLTIMKETL RVKDEELQNL AKDIRARDAT IKEIANKLTE TAEAAEAAAS AAHTMDEQRR LLCSEIERLR QAMERQMEQS MLKLRQSEEK VISLSKEKDQ
301: LLKERDAALQ EAHMWRTELG KAREQAVIQE ATIARADEKV RASEADAAAR IKEAAEKLHA VEKEKEELLS LVGILQSQVQ REQSSTKQVC EERSESCSGT
401: DNSPPLTKHV DASDDDVDKA CVSDSRSVLV SNDNTEVQLA VDGVDIRPIG DAEWGSFQQS EALIADVREV SPESEGGSLD IPVVNPPPVS DHIQGGATHP

Best Arabidopsis Sequence Match ( AT2G30880.1 )
(BLAST)

001: MASNGASPRI VDATENSLDK IKRQLASGSG RNLLQGPLFK RSETLRKWNE RWVILDPTTG KMEYKTRRNE PTIKGTILFD ENSTISISPV NFQGLPKYNG
101: CCIYIGTPQK KDYFLCAETP GAAKAWVTTL HATQLVLKAH KEAVESLSGS GSATLGTVAT VVAAANSTAL ECSREIQAAM QISLRNALKI TPNKPIDGPL
201: DDLTIMKETL RVKDEELHNL ARELRSRDSM IKEIADKLSE TAEAAVAAAS AAHTMDEQRK IVCVEFERLT TDSQRQQEAT KLKLKELEEK TFTLSKEKDQ
301: LVKERDAALQ EAHMWRSELG KARERVVILE GAVVRAEEKV RVAEASGEAK SKEASQREAT AWTEKQELLA YVNMLQTQLQ RQQLETKQVC EEKTESTNGE
401: ASLPMTKETE KNVDKACLSI SRTASIPGEN VVHMSEEQVV NAQPPVGENE WNDIQATEAR VSDVREISAE TERDRRNSLD IPVVSPEPNV PRNDPPSESF
501: HHQP

Arabidopsis Description

At2g30880/F7F1.9 [Source:UniProtKB/TrEMBL;Acc:Q8VYJ6]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.