Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022817.1-P | Field mustard | cytosol | 54.64 | 19.0 |
| Zm00001d007849_P002 | Maize | cytosol, plastid | 85.57 | 17.55 |
| KXG34371 | Sorghum | mitochondrion | 86.6 | 16.57 |
| TraesCS2B01G267300.1 | Wheat | cytosol | 80.41 | 16.35 |
| Os07t0138100-01 | Rice | cytosol | 81.44 | 16.32 |
| TraesCS2D01G255300.2 | Wheat | cytosol | 80.41 | 16.05 |
| TraesCS2A01G254800.2 | Wheat | cytosol | 80.41 | 16.05 |
| GSMUA_Achr9P10020_001 | Banana | cytosol | 59.79 | 11.72 |
| CDY23978 | Canola | cytosol | 55.67 | 11.59 |
| Solyc05g021100.2.1 | Tomato | cytosol, nucleus, plastid | 50.52 | 11.16 |
| AT2G30880.1 | Thale cress | cytosol, plastid | 57.73 | 11.11 |
| GSMUA_Achr5P02150_001 | Banana | cytosol, plastid | 56.7 | 11.04 |
| KRH73621 | Soybean | endoplasmic reticulum | 55.67 | 11.02 |
| Zm00001d013589_P006 | Maize | cytosol, plastid | 56.7 | 11.0 |
| CDX97786 | Canola | cytosol, plastid | 56.7 | 10.98 |
| Bra021674.1-P | Field mustard | cytosol | 56.7 | 10.93 |
| CDY29635 | Canola | cytosol, plastid | 56.7 | 10.93 |
| KRH14510 | Soybean | cytosol | 54.64 | 10.82 |
| HORVU2Hr1G060900.13 | Barley | plastid | 53.61 | 10.57 |
| VIT_12s0028g00830.t01 | Wine grape | cytosol | 53.61 | 10.4 |
| Zm00001d034954_P001 | Maize | extracellular | 56.7 | 9.6 |
| Zm00001d033157_P001 | Maize | mitochondrion | 5.15 | 3.18 |
Protein Annotations
| EnsemblPlants:Zm00001d018772_P001 | EnsemblPlants:Zm00001d018772_T001 | EnsemblPlantsGene:Zm00001d018772 | ncoils:Coil | PANTHER:PTHR24356 | PANTHER:PTHR24356:SF215 |
| ProteinID:ONM51262.1 | SEG:seg | UniParc:UPI00084445FB | UniProt:A0A1D6HS15 | MapMan:35.2 | : |
Description
Pleckstrin homology (PH) domain-containing protein
Coordinates
chr7:+:4777083..4778887
Molecular Weight (calculated)
10639.9 Da
IEP (calculated)
9.201
GRAVY (calculated)
-0.287
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MVMQNEVEAA VKISLLAALG STTNKLAKGQ LDDLTVTTLR KSEEKAKFLV GERDRLLTER DSALQEAQMW RSELGKARGN AAILEAAVVR AEEKARV
001: MASNGASPRI VDATENSLDK IKRQLASGSG RNLLQGPLFK RSETLRKWNE RWVILDPTTG KMEYKTRRNE PTIKGTILFD ENSTISISPV NFQGLPKYNG
101: CCIYIGTPQK KDYFLCAETP GAAKAWVTTL HATQLVLKAH KEAVESLSGS GSATLGTVAT VVAAANSTAL ECSREIQAAM QISLRNALKI TPNKPIDGPL
201: DDLTIMKETL RVKDEELHNL ARELRSRDSM IKEIADKLSE TAEAAVAAAS AAHTMDEQRK IVCVEFERLT TDSQRQQEAT KLKLKELEEK TFTLSKEKDQ
301: LVKERDAALQ EAHMWRSELG KARERVVILE GAVVRAEEKV RVAEASGEAK SKEASQREAT AWTEKQELLA YVNMLQTQLQ R
101: CCIYIGTPQK KDYFLCAETP GAAKAWVTTL HATQLVLKAH KEAVESLSGS GSATLGTVAT VVAAANSTAL ECSREIQAAM QISLRNALKI TPNKPIDGPL
201: DDLTIMKETL RVKDEELHNL ARELRSRDSM IKEIADKLSE TAEAAVAAAS AAHTMDEQRK IVCVEFERLT TDSQRQQEAT KLKLKELEEK TFTLSKEKDQ
301: LVKERDAALQ EAHMWRSELG KARERVVILE GAVVRAEEKV RVAEASGEAK SKEASQREAT AWTEKQELLA YVNMLQTQLQ R
Arabidopsis Description
At2g30880/F7F1.9 [Source:UniProtKB/TrEMBL;Acc:Q8VYJ6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.