Factsheet for PGSC0003DMT400021210

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 2
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g062640.2.1	Tomato	cytosol	98.89	66.42
Zm00001d011132_P001	Maize	cytosol, nucleus	54.44	32.89
PGSC0003DMT400019552	Potato	cytosol, peroxisome, plastid	38.89	32.71
HORVU7Hr1G029040.1	Barley	cytosol, peroxisome	65.56	20.14
Os01t0583100-01	Rice	cytosol	74.44	16.92
GSMUA_Achr7P24000_001	Banana	cytosol	72.22	16.58
GSMUA_Achr8P05700_001	Banana	cytosol, peroxisome, plasma membrane	74.44	15.37
Zm00001d009747_P001	Maize	cytosol	72.22	15.37
Zm00001d011202_P002	Maize	cytosol, peroxisome, plastid	74.44	15.3
TraesCS1D01G449700.1	Wheat	cytosol	68.89	15.12
TraesCS1A01G441200.1	Wheat	cytosol	68.89	15.05
PGSC0003DMT400094534	Potato	cytosol	33.33	15.0
TraesCS3D01G212100.1	Wheat	peroxisome, plasma membrane, vacuole	78.89	14.92
HORVU3Hr1G050340.1	Barley	plasma membrane, vacuole	78.89	14.88
HORVU1Hr1G094840.9	Barley	extracellular, mitochondrion	68.89	14.83
TraesCS3A01G209200.1	Wheat	peroxisome, plasma membrane, vacuole	78.89	14.82
TraesCS3B01G240000.1	Wheat	peroxisome, plasma membrane, vacuole	78.89	14.82
PGSC0003DMT400075333	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	87.78	14.74
KXG22681	Sorghum	cytosol	70.0	14.72
KRH61549	Soybean	cytosol	88.89	14.71
HORVU3Hr1G067380.4	Barley	cytosol	54.44	14.54
OQU87413	Sorghum	cytosol	61.11	14.36
KRH52222	Soybean	cytosol	86.67	14.34
Zm00001d038846_P001	Maize	cytosol, nucleus	58.89	14.32
Zm00001d039163_P002	Maize	cytosol	67.78	14.22
TraesCS1A01G358600.1	Wheat	cytosol	60.0	14.21
TraesCS1B01G375100.1	Wheat	cytosol	60.0	14.17
TraesCS1D01G363500.1	Wheat	cytosol	60.0	14.14
HORVU1Hr1G080290.6	Barley	cytosol	60.0	14.06
KXG22422	Sorghum	cytosol, nucleus, plastid	58.89	13.95
Os05t0592800-02	Rice	endoplasmic reticulum, vacuole	68.89	13.93
TraesCS1B01G475700.1	Wheat	cytosol	68.89	13.93
Zm00001d044301_P001	Maize	cytosol, nucleus	74.44	13.84
KRH05300	Soybean	cytosol	85.56	13.8
EES00964	Sorghum	peroxisome, plasma membrane, vacuole	73.33	13.69
KRH15739	Soybean	cytosol	84.44	13.64
GSMUA_Achr3P26270_001	Banana	cytosol, peroxisome, plastid	72.22	13.1
PGSC0003DMT400006608	Potato	plastid	77.78	12.84
TraesCS3A01G249000.1	Wheat	cytosol	54.44	12.69
TraesCS3D01G249000.1	Wheat	cytosol	53.33	12.66
PGSC0003DMT400046382	Potato	cytosol	74.44	12.32
TraesCS3B01G277900.1	Wheat	cytosol	54.44	11.75
PGSC0003DMT400090149	Potato	cytosol	42.22	11.45
PGSC0003DMT400091100	Potato	cytosol, nucleus, plastid	37.78	9.94
PGSC0003DMT400043146	Potato	nucleus	41.11	9.02
PGSC0003DMT400069947	Potato	cytosol	40.0	8.61
PGSC0003DMT400023517	Potato	nucleus	35.56	8.02
PGSC0003DMT400077989	Potato	cytosol	35.56	7.8
PGSC0003DMT400050448	Potato	cytosol	33.33	7.54
PGSC0003DMT400057134	Potato	mitochondrion	23.33	7.19
PGSC0003DMT400078131	Potato	golgi, vacuole	20.0	5.75
Os05t0537400-00	Rice	cytosol	4.44	1.35
Zm00001d011131_P001	Maize	cytosol	3.33	1.06
TraesCS7A01G047900.1	Wheat	cytosol, mitochondrion, peroxisome	1.11	0.9
HORVU3Hr1G067360.1	Barley	cytosol, peroxisome	0.0	0.0
PGSC0003DMT400049695	Potato	extracellular	0.0	0.0

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	UniProt:M1AES5	PFAM:PF00481
EnsemblPlantsGene:PGSC0003DMG400008212	PGSC:PGSC0003DMG400008212	EnsemblPlants:PGSC0003DMT400021210	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF373	SUPFAM:SSF81606	UniParc:UPI000296CD10	:

Description

Abscisic insensitive 1B [Source:PGSC_GENE;Acc:PGSC0003DMG400008212]

Coordinates

chr8:-:34753042..34753447

Molecular Weight (calculated)

10155.3 Da

IEP (calculated)

8.511

GRAVY (calculated)

-0.316

Length

90 amino acids

Sequence
(BLAST)

1: MFIPRTKDDE CLILASDGLW DVMTNEEVCD LARKRILLWH RKNGVTLPSE RGQGIDPAAA ECLSNRALSK DNITVIVVDL KAQRKFKSKT

Best Arabidopsis Sequence Match ( AT1G72770.1 )
(BLAST)

001: MEEMTPAVAM TLSLAANTMC ESSPVEITQL KNVTDAADLL SDSENQSFCN GGTECTMEDV SELEEVGEQD LLKTLSDTRS GSSNVFDEDD VLSVVEDNSA
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GDRYLKPYVI PEPEVTFMPR SREDECLILA SDGLWDVMNN QEVCEIARRR ILMWHKKNGA PPLAERGKGI DPACQAAADY LSMLALQKGS KDNISIIVID
501: LKAQRKFKTR T

Arabidopsis Description

HAB1Protein phosphatase 2C 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.