Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G441200.1 | Wheat | cytosol | 91.87 | 93.2 |
| TraesCS1D01G449700.1 | Wheat | cytosol | 90.67 | 92.44 |
| TraesCS1B01G475700.1 | Wheat | cytosol | 89.95 | 84.49 |
| PGSC0003DMT400021210 | Potato | cytosol, nucleus, peroxisome | 14.83 | 68.89 |
| HORVU7Hr1G029040.1 | Barley | cytosol, peroxisome | 47.61 | 67.92 |
| Os05t0592800-02 | Rice | endoplasmic reticulum, vacuole | 72.25 | 67.87 |
| Zm00001d009747_P001 | Maize | cytosol | 68.66 | 67.85 |
| KXG22681 | Sorghum | cytosol | 69.38 | 67.76 |
| Zm00001d039163_P002 | Maize | cytosol | 68.9 | 67.13 |
| Solyc08g062640.2.1 | Tomato | cytosol | 21.29 | 66.42 |
| HORVU3Hr1G050340.1 | Barley | plasma membrane, vacuole | 68.9 | 60.38 |
| GSMUA_Achr7P24000_001 | Banana | cytosol | 53.59 | 57.14 |
| HORVU3Hr1G067360.1 | Barley | cytosol, peroxisome | 6.94 | 56.86 |
| HORVU3Hr1G067380.4 | Barley | cytosol | 44.26 | 54.9 |
| GSMUA_Achr8P05700_001 | Banana | cytosol, peroxisome, plasma membrane | 56.46 | 54.13 |
| HORVU1Hr1G080290.6 | Barley | cytosol | 47.37 | 51.56 |
| CDX96761 | Canola | cytosol | 42.34 | 50.57 |
| CDX83901 | Canola | cytosol | 40.91 | 48.86 |
| Bra016595.1-P | Field mustard | cytosol | 47.13 | 48.05 |
| GSMUA_Achr3P26270_001 | Banana | cytosol, peroxisome, plastid | 56.22 | 47.38 |
| CDX72943 | Canola | cytosol, peroxisome, plastid | 49.04 | 43.16 |
| Solyc12g096020.1.1 | Tomato | cytosol, nucleus, plastid | 52.15 | 42.91 |
| Bra016034.1-P | Field mustard | cytosol, peroxisome, plastid | 49.04 | 42.36 |
| CDX96432 | Canola | cytosol, peroxisome, plastid | 49.04 | 42.36 |
| VIT_04s0008g01420.t01 | Wine grape | cytosol | 54.78 | 41.56 |
| KRH61549 | Soybean | cytosol | 53.83 | 41.36 |
| PGSC0003DMT400075333 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 52.87 | 41.23 |
| CDY26234 | Canola | cytosol | 48.8 | 41.13 |
| KRH52222 | Soybean | cytosol | 53.35 | 40.99 |
| AT1G72770.1 | Thale cress | cytosol | 50.0 | 40.9 |
| VIT_09s0002g01850.t01 | Wine grape | cytosol, peroxisome, plastid | 52.87 | 40.33 |
| KRH05300 | Soybean | cytosol | 53.83 | 40.32 |
| KRH15739 | Soybean | cytosol | 53.59 | 40.22 |
| Bra025964.1-P | Field mustard | cytosol | 48.56 | 39.96 |
| CDY48313 | Canola | cytosol | 47.85 | 39.92 |
| PGSC0003DMT400006608 | Potato | plastid | 51.67 | 39.63 |
| HORVU3Hr1G059170.2 | Barley | cytosol, nucleus | 37.56 | 39.35 |
| AT1G17550.1 | Thale cress | cytosol | 48.09 | 39.33 |
| HORVU1Hr1G090360.2 | Barley | cytosol, mitochondrion, nucleus | 35.41 | 37.47 |
| HORVU7Hr1G008370.1 | Barley | cytosol, peroxisome | 9.33 | 37.14 |
| HORVU3Hr1G085930.3 | Barley | nucleus, plastid | 33.97 | 36.13 |
| HORVU4Hr1G060370.1 | Barley | nucleus | 33.49 | 35.0 |
| Solyc08g062650.2.1 | Tomato | extracellular | 38.28 | 34.12 |
| HORVU7Hr1G008520.2 | Barley | cytosol | 13.16 | 33.13 |
| HORVU7Hr1G008470.2 | Barley | cytosol | 29.43 | 33.06 |
| HORVU2Hr1G000090.2 | Barley | cytosol | 30.62 | 28.19 |
| HORVU7Hr1G008560.2 | Barley | mitochondrion | 15.79 | 27.16 |
| HORVU7Hr1G008550.1 | Barley | cytosol | 14.11 | 26.11 |
| HORVU7Hr1G093200.5 | Barley | endoplasmic reticulum, plastid | 24.88 | 9.44 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:11.1.2.1.1.2 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 | UniProt:A0A287GTS4 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006464 |
| GO:GO:0006470 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009414 | GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009788 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 | GO:GO:0046872 | GO:GO:0048364 | EnsemblPlantsGene:HORVU1Hr1G094840 |
| EnsemblPlants:HORVU1Hr1G094840.9 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 | InterPro:PP2C | InterPro:PP2C_BS |
| InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF312 |
| SMART:SM00332 | SUPFAM:SSF81606 | SignalP:SignalP-noTM | UniParc:UPI000B47DB2E | SEG:seg | : |
Description
No Description!
Coordinates
chrchr1H:-:556480776..556482433
Molecular Weight (calculated)
44446.4 Da
IEP (calculated)
5.471
GRAVY (calculated)
-0.145
Length
418 amino acids
Sequence
(BLAST)
(BLAST)
001: WPRALVAMDA LGAALPRLAL ADADPGPDDA CGSPCSVASD CSSVASADFE GLFSPSGADA GPPSLLSDDL PAAAAEAATV PCRSVFALDS PPLWGLQSVC
101: GRRPEMEDAA AVVPRFHRVP LWMVAGDGAA VDDLDRTSFR LPAHFFAVYD GHGGAEVADY CRDKLHTALV QELRAAEGRV GGCDDLSSLD SKKQWEKAFV
201: DCFCRVDAEV EAPDTAGSTA VAAVVCSSHI IVSNCGDSRA VLCRGKAPLP LSLDHKPNRE DEYARIEALG GKVIQWNGYR VLGVLAMSRS IGDRYLKPYI
301: IPVPEVTVVA RAREDECLIL ASDGLWDVLS NEEVCDAARK RILLWHKKNA AAAASSSSSR GGDGASPDPA AQAAAEYLSK LALHKGSKDN ITVLVVDLKA
401: HRKLRSKTDN NNRYRKQQ
101: GRRPEMEDAA AVVPRFHRVP LWMVAGDGAA VDDLDRTSFR LPAHFFAVYD GHGGAEVADY CRDKLHTALV QELRAAEGRV GGCDDLSSLD SKKQWEKAFV
201: DCFCRVDAEV EAPDTAGSTA VAAVVCSSHI IVSNCGDSRA VLCRGKAPLP LSLDHKPNRE DEYARIEALG GKVIQWNGYR VLGVLAMSRS IGDRYLKPYI
301: IPVPEVTVVA RAREDECLIL ASDGLWDVLS NEEVCDAARK RILLWHKKNA AAAASSSSSR GGDGASPDPA AQAAAEYLSK LALHKGSKDN ITVLVVDLKA
401: HRKLRSKTDN NNRYRKQQ
001: MEEMTPAVAM TLSLAANTMC ESSPVEITQL KNVTDAADLL SDSENQSFCN GGTECTMEDV SELEEVGEQD LLKTLSDTRS GSSNVFDEDD VLSVVEDNSA
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GDRYLKPYVI PEPEVTFMPR SREDECLILA SDGLWDVMNN QEVCEIARRR ILMWHKKNGA PPLAERGKGI DPACQAAADY LSMLALQKGS KDNISIIVID
501: LKAQRKFKTR T
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GDRYLKPYVI PEPEVTFMPR SREDECLILA SDGLWDVMNN QEVCEIARRR ILMWHKKNGA PPLAERGKGI DPACQAAADY LSMLALQKGS KDNISIIVID
501: LKAQRKFKTR T
Arabidopsis Description
HAB1Protein phosphatase 2C 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.