Factsheet for HORVU4Hr1G060100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G080290.6
HORVU1Hr1G094840.9
HORVU3Hr1G050340.1
HORVU3Hr1G067360.1
HORVU3Hr1G067380.4
HORVU3Hr1G085930.3
HORVU4Hr1G060370.1
HORVU7Hr1G029040.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73000.1	HORVU1Hr1G080290.6	AT1G72770.1	19407142
AT1G73000.1	HORVU1Hr1G094840.9	AT1G72770.1	19407142
AT1G73000.1	HORVU3Hr1G050340.1	AT1G72770.1	19407142
AT1G73000.1	HORVU3Hr1G067360.1	AT1G72770.1	19407142
AT1G73000.1	HORVU3Hr1G067380.4	AT1G72770.1	19407142
AT1G73000.1	HORVU7Hr1G029040.1	AT1G72770.1	19407142
AT1G73000.1	HORVU3Hr1G085930.3	AT3G11410.1	19407142
AT1G73000.1	HORVU4Hr1G060370.1	AT3G11410.1	19407142
AT2G26040.1	HORVU1Hr1G080290.6	AT1G72770.1	19407142
AT2G26040.1	HORVU1Hr1G094840.9	AT1G72770.1	19407142
AT2G26040.1	HORVU3Hr1G050340.1	AT1G72770.1	19407142
AT2G26040.1	HORVU3Hr1G067360.1	AT1G72770.1	19407142
AT2G26040.1	HORVU3Hr1G067380.4	AT1G72770.1	19407142
AT2G26040.1	HORVU7Hr1G029040.1	AT1G72770.1	19407142
AT2G26040.1	HORVU3Hr1G085930.3	AT3G11410.1	19407142
AT2G26040.1	HORVU4Hr1G060370.1	AT3G11410.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G060110.1	Barley	mitochondrion	79.59	79.59
HORVU3Hr1G030210.5	Barley	plastid	81.63	68.97
HORVU3Hr1G040680.1	Barley	plastid	74.49	63.48
HORVU7Hr1G088140.2	Barley	cytosol	72.45	36.22
TraesCS7B01G269600.1	Wheat	cytosol	72.45	36.04
TraesCS7A01G358200.1	Wheat	cytosol	71.43	35.71
TraesCS7D01G364600.1	Wheat	cytosol	71.43	35.53
Solyc08g065410.1.1	Tomato	cytosol	51.02	34.25
EER88529	Sorghum	cytosol	66.33	31.86
Os06t0562200-01	Rice	cytosol	66.33	31.4
GSMUA_Achr7P09320_001	Banana	cytosol	57.14	30.11
KRH05492	Soybean	cytosol	55.1	28.72
GSMUA_Achr6P00980_001	Banana	cytosol	57.14	28.72
GSMUA_Achr10P...	Banana	cytosol	57.14	28.43
KRH52194	Soybean	cytosol	54.08	28.34
VIT_04s0008g00890.t01	Wine grape	cytosol	53.06	28.11
KRH61500	Soybean	cytosol	54.08	28.04
PGSC0003DMT400075340	Potato	cytosol	53.06	27.37
Solyc12g095970.1.1	Tomato	cytosol	52.04	26.84
PGSC0003DMT400077008	Potato	cytosol	50.0	26.06
HORVU3Hr1G107030.1	Barley	mitochondrion	76.53	25.95
CDY11503	Canola	cytosol	48.98	25.53
CDX76731	Canola	cytosol	48.98	25.53
Bra007772.1-P	Field mustard	cytosol	48.98	25.53
AT2G26040.1	Thale cress	cytosol	48.98	25.26
KRH15519	Soybean	cytosol	53.06	24.76
HORVU1Hr1G070420.1	Barley	mitochondrion	50.0	24.38
CDY48030	Canola	plastid	48.98	23.41
CDY22516	Canola	plastid	48.98	23.41
CDX82120	Canola	plastid	48.98	23.41
Bra008064.1-P	Field mustard	plastid	48.98	23.41
HORVU3Hr1G088100.1	Barley	plastid	47.96	22.82
HORVU3Hr1G039010.1	Barley	plastid	47.96	22.82
AT1G73000.1	Thale cress	cytosol, plastid	46.94	22.01
HORVU4Hr1G055220.1	Barley	cytosol	50.0	21.88
HORVU3Hr1G054230.1	Barley	mitochondrion	34.69	21.38
HORVU7Hr1G079270.1	Barley	cytosol	35.71	17.77
HORVU1Hr1G050110.1	Barley	plastid	47.96	17.15
HORVU0Hr1G032390.2	Barley	cytosol, extracellular	14.29	16.28
HORVU1Hr1G030390.2	Barley	extracellular, mitochondrion, plasma membrane	42.86	14.43

Protein Annotations

EnsemblPlants:HORVU4Hr1G060100.1	EnsemblPlantsGene:HORVU4Hr1G060100	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:START-like_dom_sf	PANTHER:PTHR31213
PANTHER:PTHR31213:SF22	SUPFAM:SSF55961	UniParc:UPI000B47BFEB	UniProt:A0A287P8V8	MapMan:11.1.2.1.1.1	:

Description

No Description!

Coordinates

chrchr4H:+:503828229..503828716

Molecular Weight (calculated)

10925.8 Da

IEP (calculated)

6.670

GRAVY (calculated)

-0.328

Length

98 amino acids

Sequence
(BLAST)

1: VHNFGNPRRY KHFMRTSALV ARDKASIGNA REDTIVSGLP TSTSSERLEI LDDGSHILSF SIVDGEHCLR NYRYVSSVTE IQPGPYCAIL ESYVVHDG

Best Arabidopsis Sequence Match ( AT2G26040.1 )
(BLAST)

001: MSSSPAVKGL TDEEQKTLEP VIKTYHQFEP DPTTCTSLIT QRIHAPASVV WPLIRRFDNP ERYKHFVKRC RLISGDGDVG SVREVTVISG LPASTSTERL
101: EFVDDDHRVL SFRVVGGEHR LKNYKSVTSV NEFLNQDSGK VYTVVLESYT VDIPEGNTEE DTKMFVDTVV KLNLQKLGVA ATSAPMHDDE

Arabidopsis Description

PYL2Abscisic acid receptor PYL2 [Source:UniProtKB/Swiss-Prot;Acc:O80992]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.