CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER92493
EER96576
EES00964
EES01744
KXG22152
KXG22422
KXG22681
KXG35986
OQU87413

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73000.1	EES00964	AT1G72770.1	19407142
AT1G73000.1	KXG22422	AT1G72770.1	19407142
AT1G73000.1	KXG22681	AT1G72770.1	19407142
AT1G73000.1	OQU87413	AT1G72770.1	19407142
AT1G73000.1	EER92493	AT3G11410.1	19407142
AT1G73000.1	EER96576	AT3G11410.1	19407142
AT1G73000.1	EES01744	AT3G11410.1	19407142
AT1G73000.1	KXG22152	AT3G11410.1	19407142
AT1G73000.1	KXG35986	AT3G11410.1	19407142
AT2G26040.1	EES00964	AT1G72770.1	19407142
AT2G26040.1	KXG22422	AT1G72770.1	19407142
AT2G26040.1	KXG22681	AT1G72770.1	19407142
AT2G26040.1	OQU87413	AT1G72770.1	19407142
AT2G26040.1	EER92493	AT3G11410.1	19407142
AT2G26040.1	EER96576	AT3G11410.1	19407142
AT2G26040.1	EES01744	AT3G11410.1	19407142
AT2G26040.1	KXG22152	AT3G11410.1	19407142
AT2G26040.1	KXG35986	AT3G11410.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G358200.1	Wheat	cytosol	82.84	86.22
TraesCS7D01G364600.1	Wheat	cytosol	82.84	85.79
HORVU7Hr1G088140.2	Barley	cytosol	82.35	85.71
TraesCS7B01G269600.1	Wheat	cytosol	82.35	85.28
Os06t0562200-01	Rice	cytosol	79.9	78.74
EES06532	Sorghum	cytosol	74.02	74.02
HORVU4Hr1G060110.1	Barley	mitochondrion	33.33	69.39
HORVU3Hr1G030210.5	Barley	plastid	39.22	68.97
GSMUA_Achr7P09320_001	Banana	cytosol	62.25	68.28
HORVU4Hr1G060100.1	Barley	mitochondrion	31.86	66.33
GSMUA_Achr6P00980_001	Banana	cytosol	62.25	65.13
Solyc08g065410.1.1	Tomato	cytosol	45.59	63.7
HORVU3Hr1G040680.1	Barley	plastid	35.78	63.48
GSMUA_Achr10P...	Banana	cytosol	61.27	63.45
VIT_04s0008g00890.t01	Wine grape	cytosol	56.86	62.7
CDY11503	Canola	cytosol	56.86	61.7
Bra007772.1-P	Field mustard	cytosol	56.86	61.7
CDX76731	Canola	cytosol	56.37	61.17
PGSC0003DMT400075340	Potato	cytosol	56.86	61.05
Solyc12g095970.1.1	Tomato	cytosol	55.88	60.0
KRH52194	Soybean	cytosol	54.9	59.89
KRH61500	Soybean	cytosol	54.41	58.73
KRH05492	Soybean	cytosol	53.92	58.51
AT2G26040.1	Thale cress	cytosol	54.41	58.42
PGSC0003DMT400077008	Potato	cytosol	53.43	57.98
KRH15519	Soybean	cytosol	54.41	52.86
CDY48030	Canola	plastid	51.96	51.71
CDX82120	Canola	plastid	51.96	51.71
CDY22516	Canola	plastid	51.47	51.22
Bra008064.1-P	Field mustard	plastid	51.47	51.22
AT1G73000.1	Thale cress	cytosol, plastid	50.49	49.28
EER92405	Sorghum	plastid	50.98	46.85
EES19683	Sorghum	plastid	49.51	46.76
OQU92088	Sorghum	cytosol	48.53	46.7
EES17886	Sorghum	cytosol	40.2	41.62
EES04864	Sorghum	cytosol	39.22	37.91
OQU87775	Sorghum	endoplasmic reticulum, extracellular	42.65	31.99
HORVU3Hr1G107030.1	Barley	mitochondrion	39.71	28.03

Protein Annotations

MapMan:11.1.2.1.1.1	Gene3D:3.30.530.20	EntrezGene:8076724	UniProt:C5Z4P3	EnsemblPlants:EER88529	ProteinID:EER88529
ProteinID:EER88529.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0006950
GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008289
GO:GO:0009409	GO:GO:0009414	GO:GO:0009628	GO:GO:0009719	GO:GO:0009738	GO:GO:0009791
GO:GO:0009845	GO:GO:0009987	GO:GO:0010427	GO:GO:0019538	GO:GO:0042803	GO:GO:1905183
InterPro:IPR023393	PFAM:PF10604	PANTHER:PTHR31213	PANTHER:PTHR31213:SF22	InterPro:Polyketide_cyclase/dehydratase	EnsemblPlantsGene:SORBI_3010G169100
SUPFAM:SSF55961	InterPro:START-like_dom_sf	UniParc:UPI0001A89291	RefSeq:XP_002437162.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:+:49911879..49913473

Molecular Weight (calculated)

21998.9 Da

IEP (calculated)

7.604

GRAVY (calculated)

-0.169

Length

204 amino acids

Sequence
(BLAST)

001: METHVERALR ATLTEAEVRA LEPAVREHHT FPAGRVAAGT TTPTPTTCTS LVAQRVSAPV RAVWPIVRSF GNPQRYKHFV RTCALAAGDG ASVGSVREVT
101: VVSGLPASSS TERLEVLDDD RHILSFRVVG GDHRLRNYRS VTSVTEFQPG PYCVVVESYA VDVPEGNTAE DTRMFTDTVV RLNLQKLAAV AEESAAAAAA
201: GNRR

Best Arabidopsis Sequence Match ( AT2G26040.1 )
(BLAST)

001: MSSSPAVKGL TDEEQKTLEP VIKTYHQFEP DPTTCTSLIT QRIHAPASVV WPLIRRFDNP ERYKHFVKRC RLISGDGDVG SVREVTVISG LPASTSTERL
101: EFVDDDHRVL SFRVVGGEHR LKNYKSVTSV NEFLNQDSGK VYTVVLESYT VDIPEGNTEE DTKMFVDTVV KLNLQKLGVA ATSAPMHDDE

Arabidopsis Description

PYL2Abscisic acid receptor PYL2 [Source:UniProtKB/Swiss-Prot;Acc:O80992]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.