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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • plastid 4
  • cytosol 2
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX82120 Canola plastid 87.08 88.78
CDY48030 Canola plastid 86.6 88.29
CDY22516 Canola plastid 86.12 87.8
Bra008064.1-P Field mustard plastid 85.65 87.32
GSMUA_Achr7P09320_001 Banana cytosol 53.59 60.22
Zm00001d016294_P001 Maize cytosol 52.15 57.98
GSMUA_Achr6P00980_001 Banana cytosol 54.07 57.95
GSMUA_Achr10P... Banana cytosol 53.11 56.35
AT2G26040.1 Thale cress cytosol 51.2 56.32
TraesCS3A01G154400.1 Wheat cytosol 52.15 55.33
TraesCS3D01G161500.1 Wheat cytosol, nucleus, plastid 52.15 54.23
EES06532 Sorghum cytosol 52.15 53.43
HORVU7Hr1G088140.2 Barley cytosol 49.76 53.06
TraesCS7D01G364600.1 Wheat cytosol 49.76 52.79
TraesCS7A01G358200.1 Wheat cytosol 49.28 52.55
TraesCS7B01G269600.1 Wheat cytosol 49.28 52.28
Os02t0226801-00 Rice cytosol 51.2 50.95
EER88529 Sorghum cytosol 49.28 50.49
Os06t0562200-01 Rice cytosol 48.8 49.28
HORVU3Hr1G030210.5 Barley plastid 26.32 47.41
AT4G17870.1 Thale cress cytosol 43.06 47.12
HORVU4Hr1G060100.1 Barley mitochondrion 22.01 46.94
HORVU4Hr1G060110.1 Barley mitochondrion 21.53 45.92
HORVU3Hr1G040680.1 Barley plastid 23.92 43.48
AT5G45860.1 Thale cress cytosol 32.54 42.24
AT5G45870.1 Thale cress cytosol 32.06 42.14
AT5G46790.1 Thale cress nucleus 43.54 41.18
AT5G05440.1 Thale cress cytosol 39.23 40.39
AT4G18620.1 Thale cress cytosol 30.14 38.41
AT5G53160.2 Thale cress cytosol, nucleus, peroxisome 34.45 38.3
AT2G38310.1 Thale cress plastid 37.8 38.16
AT1G01360.1 Thale cress cytosol 32.54 36.36
AT4G27920.1 Thale cress cytosol 31.58 36.07
AT2G40330.1 Thale cress cytosol 35.89 34.88
AT4G01026.1 Thale cress cytosol 33.01 32.7
HORVU3Hr1G107030.1 Barley mitochondrion 26.79 19.38
Protein Annotations
MapMan:11.1.2.1.1.1Gene3D:3.30.530.20PDB:3KLXPDB:3OJIPDB:4DS8PDB:4DSB
PDB:4DSCPDB:4JDAPDB:5JO1PDB:5JO2EntrezGene:843631UniProt:A0A178W862
ProteinID:AAD55647.1ProteinID:AAX23801.1ProteinID:AEE35402.1ArrayExpress:AT1G73000EnsemblPlantsGene:AT1G73000RefSeq:AT1G73000
TAIR:AT1G73000RefSeq:AT1G73000-TAIR-GEnsemblPlants:AT1G73000.1TAIR:AT1G73000.1EMBL:AY735560GO:GO:0003674
GO:GO:0004864GO:GO:0004871GO:GO:0004872GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005886GO:GO:0006464
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0008289GO:GO:0009719
GO:GO:0009738GO:GO:0009987GO:GO:0010427GO:GO:0016020GO:GO:0019538GO:GO:0030234
GO:GO:0032515GO:GO:0038023GO:GO:0042802GO:GO:0042803GO:GO:0043086InterPro:IPR023393
RefSeq:NP_177443.1ProteinID:OAP13725.1PFAM:PF10604PO:PO:0007616PO:PO:0009030PANTHER:PTHR31213
PANTHER:PTHR31213:SF7Symbol:PYL3InterPro:Polyketide_cyclase/dehydrataseUniProt:Q9SSM7SUPFAM:SSF55961InterPro:START-like_dom_sf
UniParc:UPI00000A8AEASEG:seg::::
Description
PYL3RCAR13 [Source:UniProtKB/TrEMBL;Acc:A0A178W862]
Coordinates
chr1:+:27462983..27463968
Molecular Weight (calculated)
23292.7 Da
IEP (calculated)
8.689
GRAVY (calculated)
-0.270
Length
209 amino acids
Sequence
(BLAST)
001: MNLAPIHDPS SSSTTTTSSS TPYGLTKDEF STLDSIIRTH HTFPRSPNTC TSLIAHRVDA PAHAIWRFVR DFANPNKYKH FIKSCTIRVN GNGIKEIKVG
101: TIREVSVVSG LPASTSVEIL EVLDEEKRIL SFRVLGGEHR LNNYRSVTSV NEFVVLEKDK KKRVYSVVLE SYIVDIPQGN TEEDTRMFVD TVVKSNLQNL
201: AVISTASPT
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.