Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026299.1-P | Field mustard | cytosol | 80.87 | 80.43 |
| CDX89219 | Canola | cytosol | 80.87 | 80.0 |
| CDY70517 | Canola | cytosol | 80.33 | 79.46 |
| VIT_16s0050g02620.t01 | Wine grape | cytosol | 72.13 | 71.35 |
| Solyc03g007310.2.1 | Tomato | cytosol | 71.04 | 70.27 |
| PGSC0003DMT400023511 | Potato | cytosol | 69.95 | 69.19 |
| AT5G53160.2 | Thale cress | cytosol, nucleus, peroxisome | 70.49 | 68.62 |
| KRH65845 | Soybean | cytosol | 70.49 | 66.84 |
| KRH18155 | Soybean | cytosol | 69.4 | 66.49 |
| GSMUA_Achr10P... | Banana | cytosol | 67.21 | 66.13 |
| GSMUA_Achr2P19970_001 | Banana | cytosol | 65.57 | 64.52 |
| KRH53449 | Soybean | cytosol | 67.21 | 64.4 |
| AT1G01360.1 | Thale cress | cytosol | 65.03 | 63.64 |
| GSMUA_AchrUn_... | Banana | cytosol | 64.48 | 63.44 |
| GSMUA_Achr10P... | Banana | cytosol | 64.48 | 63.44 |
| GSMUA_Achr3P03480_001 | Banana | cytosol | 68.31 | 60.68 |
| HORVU0Hr1G032390.2 | Barley | cytosol, extracellular | 27.87 | 59.3 |
| Zm00001d010445_P001 | Maize | cytosol | 63.39 | 58.88 |
| EES17886 | Sorghum | cytosol | 62.84 | 58.38 |
| GSMUA_Achr8P19910_001 | Banana | mitochondrion | 66.12 | 57.89 |
| Zm00001d037719_P001 | Maize | cytosol | 62.3 | 57.87 |
| Os02t0255500-01 | Rice | cytosol | 64.48 | 57.84 |
| Zm00001d002533_P001 | Maize | cytosol | 38.8 | 56.35 |
| TraesCS1A01G126800.1 | Wheat | cytosol | 62.84 | 56.1 |
| TraesCS1B01G145800.1 | Wheat | cytosol | 62.84 | 56.1 |
| TraesCS1D01G126900.1 | Wheat | cytosol | 62.84 | 56.1 |
| KRH65286 | Soybean | cytosol | 27.87 | 56.04 |
| Os05t0213500-01 | Rice | cytosol, nucleus | 63.39 | 55.5 |
| Zm00001d016105_P001 | Maize | cytosol | 63.93 | 55.19 |
| EES04864 | Sorghum | cytosol | 62.84 | 54.5 |
| Os02t0255300-00 | Rice | cytosol, plastid | 52.46 | 53.33 |
| KRH16733 | Soybean | cytosol | 30.05 | 52.38 |
| AT4G01026.1 | Thale cress | cytosol | 60.11 | 52.13 |
| Zm00001d053396_P001 | Maize | cytosol | 61.75 | 52.07 |
| GSMUA_Achr2P15420_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 63.93 | 51.32 |
| Os06t0528300-00 | Rice | cytosol | 56.28 | 50.0 |
| TraesCS7B01G232100.1 | Wheat | cytoskeleton, cytosol, nucleus | 53.01 | 49.74 |
| Os06t0527800-01 | Rice | cytosol | 55.74 | 49.51 |
| Os06t0526400-00 | Rice | cytosol | 51.37 | 47.96 |
| TraesCS7D01G328000.1 | Wheat | cytosol | 51.37 | 47.72 |
| HORVU7Hr1G079270.1 | Barley | cytosol | 50.82 | 47.21 |
| AT5G45860.1 | Thale cress | cytosol | 40.44 | 45.96 |
| TraesCS7A01G350800.1 | Wheat | cytosol | 49.18 | 45.69 |
| AT5G45870.1 | Thale cress | cytosol | 38.8 | 44.65 |
| AT4G18620.1 | Thale cress | cytosol | 38.8 | 43.29 |
| AT2G26040.1 | Thale cress | cytosol | 42.08 | 40.53 |
| AT2G38310.1 | Thale cress | plastid | 45.36 | 40.1 |
| HORVU1Hr1G030390.2 | Barley | extracellular, mitochondrion, plasma membrane | 62.84 | 39.52 |
| AT5G05440.1 | Thale cress | cytosol | 43.17 | 38.92 |
| AT4G17870.1 | Thale cress | cytosol | 40.44 | 38.74 |
| AT2G40330.1 | Thale cress | cytosol | 44.26 | 37.67 |
| HORVU3Hr1G054230.1 | Barley | mitochondrion | 31.69 | 36.48 |
| AT5G46790.1 | Thale cress | nucleus | 40.98 | 33.94 |
| Os06t0526466-00 | Rice | cytosol, mitochondrion | 24.04 | 31.88 |
| AT1G73000.1 | Thale cress | cytosol, plastid | 36.07 | 31.58 |
Protein Annotations
| MapMan:11.1.2.1.1.1 | Gene3D:3.30.530.20 | PDB:3R6P | PDB:3RT0 | PDB:3RT2 | PDB:3UQH |
| EntrezGene:828905 | UniProt:A0A178V0C5 | ProteinID:AEE85409.1 | ArrayExpress:AT4G27920 | EnsemblPlantsGene:AT4G27920 | RefSeq:AT4G27920 |
| TAIR:AT4G27920 | RefSeq:AT4G27920-TAIR-G | EnsemblPlants:AT4G27920.1 | TAIR:AT4G27920.1 | EMBL:AY142526 | ProteinID:CAB36761.1 |
| ProteinID:CAB79594.1 | GO:GO:0003674 | GO:GO:0004864 | GO:GO:0004871 | GO:GO:0004872 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005886 | GO:GO:0006464 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008289 | GO:GO:0009719 | GO:GO:0009738 | GO:GO:0009987 | GO:GO:0010427 | GO:GO:0016020 |
| GO:GO:0019538 | GO:GO:0030234 | GO:GO:0032515 | GO:GO:0038023 | GO:GO:0042803 | GO:GO:0043086 |
| GO:GO:0080163 | InterPro:IPR023393 | RefSeq:NP_194521.2 | ProteinID:OAO99769.1 | PFAM:PF10604 | PANTHER:PTHR31213 |
| PANTHER:PTHR31213:SF12 | Symbol:PYL10 | InterPro:Polyketide_cyclase/dehydratase | UniProt:Q8H1R0 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf |
| UniParc:UPI00000ADA41 | : | : | : | : | : |
Description
PYL10RCAR4 [Source:UniProtKB/TrEMBL;Acc:A0A178V0C5]
Coordinates
chr4:+:13901142..13902000
Molecular Weight (calculated)
20642.7 Da
IEP (calculated)
6.511
GRAVY (calculated)
-0.394
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MNGDETKKVE SEYIKKHHRH ELVESQCSST LVKHIKAPLH LVWSIVRRFD EPQKYKPFIS RCVVQGKKLE VGSVREVDLK SGLPATKSTE VLEILDDNEH
101: ILGIRIVGGD HRLKNYSSTI SLHSETIDGK TGTLAIESFV VDVPEGNTKE ETCFFVEALI QCNLNSLADV TERLQAESME KKI
101: ILGIRIVGGD HRLKNYSSTI SLHSETIDGK TGTLAIESFV VDVPEGNTKE ETCFFVEALI QCNLNSLADV TERLQAESME KKI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.