Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99450 | Canola | cytosol | 79.88 | 78.92 |
| CDX78879 | Canola | cytosol | 79.88 | 78.92 |
| CDY58019 | Canola | cytosol | 79.27 | 78.31 |
| Bra013334.1-P | Field mustard | cytosol | 78.66 | 77.71 |
| AT5G45870.1 | Thale cress | cytosol | 64.02 | 66.04 |
| AT5G45860.1 | Thale cress | cytosol | 61.59 | 62.73 |
| GSMUA_Achr4P10630_001 | Banana | mitochondrion | 48.78 | 49.69 |
| KRH11022 | Soybean | cytosol | 51.22 | 45.41 |
| KRH21267 | Soybean | cytosol | 50.61 | 44.86 |
| AT4G17870.1 | Thale cress | cytosol | 46.95 | 40.31 |
| PGSC0003DMT400026521 | Potato | cytosol | 46.95 | 40.31 |
| AT2G40330.1 | Thale cress | cytosol | 51.83 | 39.53 |
| AT4G27920.1 | Thale cress | cytosol | 43.29 | 38.8 |
| AT2G38310.1 | Thale cress | plastid | 48.78 | 38.65 |
| AT1G01360.1 | Thale cress | cytosol | 43.29 | 37.97 |
| AT2G26040.1 | Thale cress | cytosol | 43.9 | 37.89 |
| AT5G05440.1 | Thale cress | cytosol | 46.34 | 37.44 |
| Solyc02g076770.1.1 | Tomato | cytosol | 47.56 | 35.78 |
| AT5G46790.1 | Thale cress | nucleus | 46.95 | 34.84 |
| AT5G53160.2 | Thale cress | cytosol, nucleus, peroxisome | 39.63 | 34.57 |
| GSMUA_Achr4P15170_001 | Banana | cytosol | 50.61 | 33.2 |
| AT4G01026.1 | Thale cress | cytosol | 41.46 | 32.23 |
| AT1G73000.1 | Thale cress | cytosol, plastid | 38.41 | 30.14 |
Protein Annotations
| MapMan:11.1.2.1.1.1 | Gene3D:3.30.530.20 | PDB:4N0G | EntrezGene:827596 | UniProt:A0A178V4P0 | ProteinID:AEE84069.1 |
| ArrayExpress:AT4G18620 | EnsemblPlantsGene:AT4G18620 | RefSeq:AT4G18620 | TAIR:AT4G18620 | RefSeq:AT4G18620-TAIR-G | EnsemblPlants:AT4G18620.1 |
| TAIR:AT4G18620.1 | ProteinID:CAB37447.1 | ProteinID:CAB78864.1 | GO:GO:0003674 | GO:GO:0004864 | GO:GO:0004871 |
| GO:GO:0004872 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005886 | GO:GO:0006464 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009719 | GO:GO:0009738 | GO:GO:0009987 |
| GO:GO:0010427 | GO:GO:0016020 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0032515 | GO:GO:0038023 |
| GO:GO:0042803 | GO:GO:0043086 | InterPro:IPR023393 | RefSeq:NP_193597.1 | ProteinID:OAP00691.1 | PFAM:PF10604 |
| PANTHER:PTHR31213 | PANTHER:PTHR31213:SF8 | Symbol:PYL13 | InterPro:Polyketide_cyclase/dehydratase | UniProt:Q9SN51 | SUPFAM:SSF55961 |
| InterPro:START-like_dom_sf | UniParc:UPI000009DEDA | SEG:seg | : | : | : |
Description
PYL13RCAR7 [Source:UniProtKB/TrEMBL;Acc:A0A178V4P0]
Coordinates
chr4:+:10254359..10254853
Molecular Weight (calculated)
18127.8 Da
IEP (calculated)
8.681
GRAVY (calculated)
-0.315
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSKQKRCR SSVVETIEAP LPLVWSILRS FDKPQAYQRF VKSCTMRSGG GGGKGGEGKG SVRDVTLVSG FPADFSTERL EELDDESHVM VVSIIGGNHR
101: LVNYKSKTKV VASPEDMAKK TVVVESYVVD VPEGTSEEDT IFFVDNIIRY NLTSLAKLTK KMMK
101: LVNYKSKTKV VASPEDMAKK TVVVESYVVD VPEGTSEEDT IFFVDNIIRY NLTSLAKLTK KMMK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.