Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY64350 | Canola | cytosol | 89.36 | 91.8 |
| CDY61488 | Canola | cytosol | 89.36 | 91.3 |
| CDY49462 | Canola | cytosol | 89.36 | 91.3 |
| CDY38728 | Canola | cytosol | 89.36 | 91.3 |
| Bra029093.1-P | Field mustard | cytosol | 88.83 | 90.76 |
| Bra003077.1-P | Field mustard | cytosol | 88.83 | 90.76 |
| CDX96197 | Canola | cytosol | 87.23 | 87.23 |
| CDY27022 | Canola | cytosol | 86.7 | 86.7 |
| Bra022634.1-P | Field mustard | cytosol | 86.7 | 86.7 |
| VIT_16s0050g02620.t01 | Wine grape | cytosol | 78.19 | 79.46 |
| Solyc03g007310.2.1 | Tomato | cytosol | 76.6 | 77.84 |
| PGSC0003DMT400023511 | Potato | cytosol | 76.6 | 77.84 |
| KRH65845 | Soybean | cytosol | 79.26 | 77.2 |
| KRH18155 | Soybean | cytosol | 77.66 | 76.44 |
| GSMUA_Achr10P... | Banana | cytosol | 71.81 | 72.58 |
| KRH53449 | Soybean | cytosol | 72.34 | 71.2 |
| GSMUA_Achr2P19970_001 | Banana | cytosol | 70.21 | 70.97 |
| AT1G01360.1 | Thale cress | cytosol | 70.21 | 70.59 |
| AT4G27920.1 | Thale cress | cytosol | 68.62 | 70.49 |
| GSMUA_Achr10P... | Banana | cytosol | 69.15 | 69.89 |
| HORVU0Hr1G032390.2 | Barley | cytosol, extracellular | 31.91 | 69.77 |
| GSMUA_AchrUn_... | Banana | cytosol | 68.62 | 69.35 |
| Os02t0255500-01 | Rice | cytosol | 72.87 | 67.16 |
| GSMUA_Achr3P03480_001 | Banana | cytosol | 72.34 | 66.02 |
| Zm00001d016105_P001 | Maize | cytosol | 70.74 | 62.74 |
| EES04864 | Sorghum | cytosol | 70.21 | 62.56 |
| TraesCS1B01G145800.1 | Wheat | cytosol | 68.09 | 62.44 |
| TraesCS1D01G126900.1 | Wheat | cytosol | 68.09 | 62.44 |
| TraesCS1A01G126800.1 | Wheat | cytosol | 68.09 | 62.44 |
| Os05t0213500-01 | Rice | cytosol, nucleus | 69.15 | 62.2 |
| EES17886 | Sorghum | cytosol | 64.36 | 61.42 |
| GSMUA_Achr8P19910_001 | Banana | mitochondrion | 68.09 | 61.24 |
| Zm00001d037719_P001 | Maize | cytosol | 63.83 | 60.91 |
| Zm00001d010445_P001 | Maize | cytosol | 63.83 | 60.91 |
| AT4G01026.1 | Thale cress | cytosol | 67.55 | 60.19 |
| Zm00001d053396_P001 | Maize | cytosol | 69.15 | 59.91 |
| KRH65286 | Soybean | cytosol | 28.19 | 58.24 |
| GSMUA_Achr2P15420_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 69.15 | 57.02 |
| KRH16733 | Soybean | cytosol | 31.38 | 56.19 |
| Os02t0255300-00 | Rice | cytosol, plastid | 51.6 | 53.89 |
| Zm00001d002533_P001 | Maize | cytosol | 35.64 | 53.17 |
| TraesCS7B01G232100.1 | Wheat | cytoskeleton, cytosol, nucleus | 54.79 | 52.82 |
| Os06t0528300-00 | Rice | cytosol | 57.45 | 52.43 |
| Os06t0527800-01 | Rice | cytosol | 56.91 | 51.94 |
| HORVU7Hr1G079270.1 | Barley | cytosol | 54.26 | 51.78 |
| TraesCS7D01G328000.1 | Wheat | cytosol | 53.72 | 51.27 |
| Os06t0526400-00 | Rice | cytosol | 52.13 | 50.0 |
| TraesCS7A01G350800.1 | Wheat | cytosol | 51.6 | 49.24 |
| AT5G45860.1 | Thale cress | cytosol | 40.43 | 47.2 |
| AT5G45870.1 | Thale cress | cytosol | 38.83 | 45.91 |
| HORVU1Hr1G030390.2 | Barley | extracellular, mitochondrion, plasma membrane | 68.09 | 43.99 |
| AT2G38310.1 | Thale cress | plastid | 46.81 | 42.51 |
| HORVU3Hr1G054230.1 | Barley | mitochondrion | 35.64 | 42.14 |
| AT4G17870.1 | Thale cress | cytosol | 41.49 | 40.84 |
| AT2G26040.1 | Thale cress | cytosol | 40.96 | 40.53 |
| AT5G05440.1 | Thale cress | cytosol | 43.62 | 40.39 |
| AT4G18620.1 | Thale cress | cytosol | 34.57 | 39.63 |
| AT5G46790.1 | Thale cress | nucleus | 43.09 | 36.65 |
| AT2G40330.1 | Thale cress | cytosol | 41.49 | 36.28 |
| AT1G73000.1 | Thale cress | cytosol, plastid | 38.3 | 34.45 |
| Os06t0526466-00 | Rice | cytosol, mitochondrion | 23.4 | 31.88 |
Protein Annotations
| MapMan:11.1.2.1.1.1 | Gene3D:3.30.530.20 | EntrezGene:835397 | UniProt:A0A178UJN3 | ProteinID:AED96316.1 | EMBL:AK228324 |
| ArrayExpress:AT5G53160 | EnsemblPlantsGene:AT5G53160 | RefSeq:AT5G53160 | TAIR:AT5G53160 | RefSeq:AT5G53160-TAIR-G | EnsemblPlants:AT5G53160.2 |
| TAIR:AT5G53160.2 | ProteinID:BAB08419.1 | EMBL:BT003112 | GO:GO:0003674 | GO:GO:0004864 | GO:GO:0004871 |
| GO:GO:0004872 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005886 | GO:GO:0006464 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009738 |
| GO:GO:0009789 | GO:GO:0009987 | GO:GO:0010427 | GO:GO:0016020 | GO:GO:0019538 | GO:GO:0030234 |
| GO:GO:0032515 | GO:GO:0038023 | GO:GO:0042803 | GO:GO:0043086 | InterPro:IPR023393 | RefSeq:NP_200128.1 |
| ProteinID:OAO93364.1 | PFAM:PF10604 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31213 | PANTHER:PTHR31213:SF12 | InterPro:Polyketide_cyclase/dehydratase | UniProt:Q9FGM1 |
| Symbol:RCAR3 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf | UniParc:UPI000000BEEE | : | : |
Description
PYL8RCAR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UJN3]
Coordinates
chr5:+:21560601..21562709
Molecular Weight (calculated)
21398.6 Da
IEP (calculated)
6.510
GRAVY (calculated)
-0.389
Length
188 amino acids
Sequence
(BLAST)
(BLAST)
001: MEANGIENLT NPNQEREFIR RHHKHELVDN QCSSTLVKHI NAPVHIVWSL VRRFDQPQKY KPFISRCVVK GNMEIGTVRE VDVKSGLPAT RSTERLELLD
101: DNEHILSIRI VGGDHRLKNY SSIISLHPET IEGRIGTLVI ESFVVDVPEG NTKDETCYFV EALIKCNLKS LADISERLAV QDTTESRV
101: DNEHILSIRI VGGDHRLKNY SSIISLHPET IEGRIGTLVI ESFVVDVPEG NTKDETCYFV EALIKCNLKS LADISERLAV QDTTESRV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.