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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU1Hr1G080290.6
HORVU1Hr1G094840.9
HORVU3Hr1G050340.1
HORVU3Hr1G067360.1
HORVU3Hr1G067380.4
HORVU7Hr1G029040.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G01360.1 HORVU1Hr1G080290.6 AT1G72770.1 19407142
AT1G01360.1 HORVU1Hr1G094840.9 AT1G72770.1 19407142
AT1G01360.1 HORVU3Hr1G050340.1 AT1G72770.1 19407142
AT1G01360.1 HORVU3Hr1G067360.1 AT1G72770.1 19407142
AT1G01360.1 HORVU3Hr1G067380.4 AT1G72770.1 19407142
AT1G01360.1 HORVU7Hr1G029040.1 AT1G72770.1 19407142
AT1G01360.1 HORVU1Hr1G080290.6 AT1G72770.1 19407143
AT1G01360.1 HORVU1Hr1G094840.9 AT1G72770.1 19407143
AT1G01360.1 HORVU3Hr1G050340.1 AT1G72770.1 19407143
AT1G01360.1 HORVU3Hr1G067360.1 AT1G72770.1 19407143
AT1G01360.1 HORVU3Hr1G067380.4 AT1G72770.1 19407143
AT1G01360.1 HORVU7Hr1G029040.1 AT1G72770.1 19407143
AT4G01026.1 HORVU1Hr1G080290.6 AT1G72770.1 19407142
AT4G01026.1 HORVU1Hr1G094840.9 AT1G72770.1 19407142
AT4G01026.1 HORVU3Hr1G050340.1 AT1G72770.1 19407142
AT4G01026.1 HORVU3Hr1G067360.1 AT1G72770.1 19407142
AT4G01026.1 HORVU3Hr1G067380.4 AT1G72770.1 19407142
AT4G01026.1 HORVU7Hr1G029040.1 AT1G72770.1 19407142
AT4G27920.1 HORVU1Hr1G080290.6 AT1G72770.1 19407142
AT4G27920.1 HORVU1Hr1G094840.9 AT1G72770.1 19407142
AT4G27920.1 HORVU3Hr1G050340.1 AT1G72770.1 19407142
AT4G27920.1 HORVU3Hr1G067360.1 AT1G72770.1 19407142
AT4G27920.1 HORVU3Hr1G067380.4 AT1G72770.1 19407142
AT4G27920.1 HORVU7Hr1G029040.1 AT1G72770.1 19407142
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G328000.1 Wheat cytosol 91.88 91.88
TraesCS7A01G350800.1 Wheat cytosol 89.85 89.85
TraesCS7B01G232100.1 Wheat cytoskeleton, cytosol, nucleus 87.82 88.72
Os06t0528300-00 Rice cytosol 63.96 61.16
Os06t0527800-01 Rice cytosol 63.45 60.68
Os06t0526400-00 Rice cytosol 59.39 59.69
Bra033267.1-P Field mustard cytosol 54.31 57.53
KRH18155 Soybean cytosol 55.33 57.07
CDX90028 Canola cytosol 54.31 56.91
AT1G01360.1 Thale cress cytosol 53.81 56.68
KRH65845 Soybean cytosol 55.33 56.48
CDY04688 Canola cytosol 53.3 56.45
GSMUA_Achr10P... Banana cytosol 53.3 56.45
VIT_02s0025g01340.t01 Wine grape cytosol 52.79 56.22
CDY15183 Canola cytosol 53.3 56.15
PGSC0003DMT400012888 Potato cytosol 50.25 55.93
VIT_16s0050g02620.t01 Wine grape cytosol 52.28 55.68
Bra003077.1-P Field mustard cytosol 51.78 55.43
CDY49462 Canola cytosol 51.78 55.43
GSMUA_Achr4P08490_001 Banana cytosol 55.84 55.28
Solyc12g055990.1.1 Tomato cytosol 50.76 55.25
CDY64350 Canola cytosol 50.76 54.64
KRH47929 Soybean cytosol 51.27 54.59
CDY61488 Canola cytosol 50.76 54.35
CDY38728 Canola cytosol 50.76 54.35
AT5G53160.2 Thale cress cytosol, nucleus, peroxisome 51.78 54.26
Solyc03g007310.2.1 Tomato cytosol 50.76 54.05
Bra029093.1-P Field mustard cytosol 50.25 53.8
GSMUA_Achr10P... Banana cytosol 50.76 53.76
CDX96197 Canola cytosol 51.27 53.72
PGSC0003DMT400023511 Potato cytosol 50.25 53.51
Solyc08g082180.2.1 Tomato cytosol 51.27 53.44
PGSC0003DMT400031686 Potato cytosol 51.27 53.44
KRH53449 Soybean cytosol 51.78 53.4
Bra022634.1-P Field mustard cytosol 50.25 52.66
GSMUA_Achr2P19970_001 Banana cytosol 49.24 52.15
CDY27022 Canola cytosol 49.75 52.13
GSMUA_AchrUn_... Banana cytosol 48.73 51.61
CDY25052 Canola cytosol 48.73 51.34
CDX74368 Canola cytosol 50.25 51.3
Solyc01g095700.2.1 Tomato cytosol 48.22 51.08
PGSC0003DMT400000606 Potato cytosol 48.22 51.08
AT4G27920.1 Thale cress cytosol 47.21 50.82
Bra000938.1-P Field mustard cytosol 49.75 50.78
VIT_15s0046g01050.t01 Wine grape cytosol 49.24 50.52
Bra003463.1-P Field mustard cytosol 47.72 50.27
CDY53905 Canola cytosol 47.72 50.27
CDX91871 Canola cytosol 48.73 49.74
GSMUA_Achr3P03480_001 Banana cytosol 50.76 48.54
Bra026299.1-P Field mustard cytosol 45.18 48.37
CDY70517 Canola cytosol 45.18 48.11
CDX89219 Canola cytosol 45.18 48.11
HORVU0Hr1G032390.2 Barley cytosol, extracellular 20.81 47.67
KRH65286 Soybean cytosol 21.83 47.25
KRH16733 Soybean cytosol 24.87 46.67
GSMUA_Achr8P19910_001 Banana mitochondrion 48.73 45.93
GSMUA_Achr4P15670_001 Banana cytosol 43.15 45.45
AT4G01026.1 Thale cress cytosol 48.22 45.02
KRH06494 Soybean cytosol, extracellular, vacuole 43.15 44.5
GSMUA_Achr2P15420_001 Banana cytosol, mitochondrion, nucleus, plastid 50.76 43.86
CDY07165 Canola cytosol 13.2 43.33
HORVU3Hr1G030210.5 Barley plastid 22.84 38.79
HORVU4Hr1G060110.1 Barley mitochondrion 19.29 38.78
Os06t0526466-00 Rice cytosol, mitochondrion 26.9 38.41
HORVU3Hr1G040680.1 Barley plastid 21.32 36.52
HORVU4Hr1G060100.1 Barley mitochondrion 17.77 35.71
HORVU7Hr1G088140.2 Barley cytosol 35.53 35.71
HORVU1Hr1G070420.1 Barley mitochondrion 36.04 35.32
HORVU1Hr1G030390.2 Barley extracellular, mitochondrion, plasma membrane 51.78 35.05
HORVU3Hr1G088100.1 Barley plastid 36.04 34.47
HORVU3Hr1G039010.1 Barley plastid 36.04 34.47
HORVU3Hr1G054230.1 Barley mitochondrion 27.41 33.96
HORVU4Hr1G055220.1 Barley cytosol 38.07 33.48
HORVU1Hr1G050110.1 Barley plastid 34.01 24.45
HORVU3Hr1G107030.1 Barley mitochondrion 21.83 14.88
Protein Annotations
EnsemblPlants:HORVU7Hr1G079270.1EnsemblPlantsGene:HORVU7Hr1G079270Gene3D:3.30.530.20InterPro:IPR023393InterPro:Polyketide_cyclase/dehydrataseInterPro:START-like_dom_sf
PANTHER:PTHR31213PANTHER:PTHR31213:SF16PFAM:PF10604SUPFAM:SSF55961UniParc:UPI00029603B6UniProt:M0WAF1
MapMan:11.1.2.1.1.1:::::
Description
No Description!
Coordinates
chrchr7H:+:467006976..467012011
Molecular Weight (calculated)
22368.9 Da
IEP (calculated)
6.343
GRAVY (calculated)
-0.256
Length
197 amino acids
Sequence
(BLAST)
001: MDGGSSGVGA DGIWRPWDEH TMLCLKEMEY VRRFHQHELG ANQCTSFIAK HIKAPLQTVW SVVRRFDKPQ VFKPFVEKCV MQGNIEPGCV REVTVKSGLP
101: AKWSIERLEL LDDNEHILRV KFIDGNHPLK NYSSILTVHH EVIDGHPGAL VIESFVVDVP EENTENEIFY LVGNFLKVNH KLLADVSEGR IDGRALN
Best Arabidopsis Sequence Match ( AT5G53160.2 )
(BLAST)
001: MEANGIENLT NPNQEREFIR RHHKHELVDN QCSSTLVKHI NAPVHIVWSL VRRFDQPQKY KPFISRCVVK GNMEIGTVRE VDVKSGLPAT RSTERLELLD
101: DNEHILSIRI VGGDHRLKNY SSIISLHPET IEGRIGTLVI ESFVVDVPEG NTKDETCYFV EALIKCNLKS LADISERLAV QDTTESRV
Arabidopsis Description
PYL8RCAR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UJN3]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.