CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH73525

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G45870.1	KRH73525	AT3G11410.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11022	Soybean	cytosol	93.51	93.51
AT5G45860.1	Thale cress	cytosol	52.43	60.25
CDY68675	Canola	cytosol	51.89	59.26
CDY58053	Canola	cytosol	51.89	59.26
AT5G45870.1	Thale cress	cytosol	49.19	57.23
Bra025048.1-P	Field mustard	cytosol	51.35	55.88
GSMUA_Achr4P10630_001	Banana	mitochondrion	46.49	53.42
AT4G18620.1	Thale cress	cytosol	44.86	50.61
CDY58019	Canola	cytosol	44.86	50.0
CDX99450	Canola	cytosol	44.86	50.0
CDX78879	Canola	cytosol	44.86	50.0
Bra013334.1-P	Field mustard	cytosol	43.78	48.8
KRH00319	Soybean	cytosol	46.49	48.59
PGSC0003DMT400026521	Potato	cytosol	49.19	47.64
KRH49452	Soybean	plastid	45.41	47.19
KRH65286	Soybean	cytosol	22.7	46.15
KRH47929	Soybean	cytosol	45.95	45.95
KRH18155	Soybean	cytosol	45.95	44.5
KRH53449	Soybean	cytosol	45.41	43.98
KRH65845	Soybean	cytosol	45.41	43.52
KRH16733	Soybean	cytosol	23.78	41.9
GSMUA_Achr4P15170_001	Banana	cytosol	55.68	41.2
KRH06494	Soybean	cytosol, extracellular, vacuole	42.16	40.84
KRH61500	Soybean	cytosol	41.62	40.74
KRH52194	Soybean	cytosol	41.08	40.64
KRH73249	Soybean	plastid	45.41	40.38
Solyc02g076770.1.1	Tomato	cytosol	47.57	40.37
KRH76014	Soybean	cytosol	47.03	40.28
KRH05492	Soybean	cytosol	40.54	39.89
KRH14908	Soybean	plastid	45.41	38.53
KRH45453	Soybean	cytosol	42.16	36.79
KRH75621	Soybean	cytosol	41.62	35.98
KRH74424	Soybean	cytosol	42.16	35.29
KRH15519	Soybean	cytosol	39.46	34.76
KRH31193	Soybean	cytosol, golgi, plastid	45.95	33.07
KRH39536	Soybean	plastid	41.08	28.57

Protein Annotations

EMBL:ACUP02008352	EnsemblPlants:KRH21267	EnsemblPlantsGene:GLYMA_13G229300	EntrezGene:100779954	Gene3D:3.30.530.20	InterPro:IPR023393
InterPro:Polyketide_cyclase/dehydratase	InterPro:START-like_dom_sf	PANTHER:PTHR31213	PANTHER:PTHR31213:SF8	PFAM:PF10604	ProteinID:KRH21267
ProteinID:KRH21267.1	SEG:seg	SUPFAM:SSF55961	UniParc:UPI000233ADD3	UniProt:I1M1T4	MapMan:11.1.2.1.1.1

Description

hypothetical protein

Coordinates

chr13:-:34145492..34146830

Molecular Weight (calculated)

20242.3 Da

IEP (calculated)

5.669

GRAVY (calculated)

-0.121

Length

185 amino acids

Sequence
(BLAST)

001: MLCKQDLETP TIKAMLNTYH ASKLSSNQCG SSLVQTIDAP LPLVWSLIRR FEYPQGYKLF VKKCNLLDGD GGIGSVREVM ITSGLPAGVS VERLDKLDDD
101: KHVLKFSIIG GDHRLVNYSS TITLHEEEEE YGGKTVAIES YAVDVPAGSS GDDTCSFANT IIACNLRSLA KITEEKVCKV NQIKL

Best Arabidopsis Sequence Match ( AT5G45860.1 )
(BLAST)

001: METSQKYHTC GSTLVQTIDA PLSLVWSILR RFDNPQAYKQ FVKTCNLSSG DGGEGSVREV TVVSGLPAEF SRERLDELDD ESHVMMISII GGDHRLVNYR
101: SKTMAFVAAD TEEKTVVVES YVVDVPEGNS EEETTSFADT IVGFNLKSLA KLSERVAHLK L

Arabidopsis Description

PYL11Abscisic acid receptor PYL11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ50]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.