CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 2
peroxisome 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH00319
KRH05492
KRH11022
KRH15519
KRH21267
KRH26375
KRH44060
KRH45453
KRH49452
KRH51554
KRH52194
KRH60872
KRH61500
KRH75621
KRH76014

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G11410.1	KRH05492	AT2G26040.1	19407142
AT3G11410.1	KRH15519	AT2G26040.1	19407142
AT3G11410.1	KRH52194	AT2G26040.1	19407142
AT3G11410.1	KRH61500	AT2G26040.1	19407142
AT3G11410.1	KRH51554	AT2G33610.1	19033529
AT3G11410.1	KRH60872	AT2G33610.1	19033529
AT3G11410.1	KRH00319	AT2G38310.1	19407142
AT3G11410.1	KRH49452	AT2G38310.1	19407142
AT3G11410.1	KRH76014	AT2G38310.1	19407142
AT3G11410.1	KRH45453	AT4G17870.1	19407142
AT3G11410.1	KRH75621	AT4G17870.1	19407142
AT3G11410.1	KRH26375	AT4G22200.1	11181729
AT3G11410.1	KRH44060	AT4G22200.1	11181729
AT3G11410.1	KRH26375	AT4G22200.1	12034902
AT3G11410.1	KRH44060	AT4G22200.1	12034902
AT3G11410.1	KRH11022	AT5G45870.1	19407142
AT3G11410.1	KRH21267	AT5G45870.1	19407142
AT3G11410.1	KRH45453	AT5G46790.1	19407142
AT3G11410.1	KRH75621	AT5G46790.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG35986	Sorghum	cytosol, peroxisome, plastid	37.74	19.7
KRH31027	Soybean	cytosol	68.87	18.2
GSMUA_AchrUn_...	Banana	cytosol	48.11	18.02
KRG97855	Soybean	cytosol	65.09	17.25
KRH15068	Soybean	cytosol	56.6	15.0
CDY67227	Canola	cytosol	51.89	14.82
CDY67257	Canola	nucleus	51.89	14.82
KRH73067	Soybean	cytosol	56.6	14.74
Bra002038.1-P	Field mustard	nucleus	52.83	14.74
CDY01017	Canola	nucleus	53.77	14.5
CDY08530	Canola	nucleus	53.77	14.5
Solyc05g052980.2.1	Tomato	nucleus	55.66	14.43
TraesCS5B01G182000.1	Wheat	peroxisome	47.17	14.33
TraesCS5D01G188600.1	Wheat	peroxisome	47.17	14.33
Bra034845.1-P	Field mustard	nucleus	53.77	14.29
PGSC0003DMT400069947	Potato	cytosol	55.66	14.11
TraesCS5A01G183600.1	Wheat	peroxisome	46.23	14.04
Solyc03g096670.2.1	Tomato	nucleus	53.77	14.04
AT3G11410.1	Thale cress	cytosol	52.83	14.04
Os09t0325700-01	Rice	cytosol	47.17	13.97
PGSC0003DMT400043146	Potato	nucleus	52.83	13.66
TraesCS4B01G210100.1	Wheat	nucleus	51.89	13.55
GSMUA_Achr6P15180_001	Banana	cytosol	47.17	13.51
EER96576	Sorghum	cytosol	45.28	13.45
Zm00001d005609_P001	Maize	cytosol, mitochondrion, nucleus, plastid	44.34	13.43
TraesCS4D01G210900.1	Wheat	nucleus	51.89	13.41
Zm00001d020100_P001	Maize	mitochondrion, nucleus, peroxisome, plastid	45.28	13.41
HORVU4Hr1G060370.1	Barley	nucleus	50.0	13.25
TraesCS4A01G094300.1	Wheat	nucleus	50.94	13.2
GSMUA_Achr11P...	Banana	cytosol	49.06	13.16
Os03t0268600-01	Rice	nucleus	50.0	13.12
GSMUA_Achr5P29000_001	Banana	cytosol	47.17	13.09
EER92493	Sorghum	nucleus	49.06	12.97
Zm00001d028574_P001	Maize	nucleus	48.11	12.88
KRH77641	Soybean	plastid	37.74	12.35
TraesCS3A01G362200.1	Wheat	nucleus, plastid	45.28	12.28
EES01744	Sorghum	plastid	47.17	12.14
HORVU3Hr1G085930.3	Barley	nucleus, plastid	44.34	11.96
KRH27848	Soybean	nucleus	37.74	11.9
Zm00001d012401_P001	Maize	cytosol, mitochondrion, nucleus, plastid	46.23	11.86
TraesCS3D01G355900.1	Wheat	plastid	44.34	11.84
Zm00001d042886_P001	Maize	nucleus	45.28	11.76
Os01t0846300-01	Rice	cytosol, mitochondrion, nucleus, plastid	45.28	11.59
TraesCS3B01G394600.3	Wheat	plastid	45.28	11.21
KXG22152	Sorghum	nucleus	49.06	11.21
KRG94219	Soybean	plastid	34.91	9.81
KRH16556	Soybean	plastid	34.91	9.59
KRH60215	Soybean	cytoskeleton, cytosol, nucleus	33.96	9.38
KRH41498	Soybean	nucleus	33.96	9.35
KRH37441	Soybean	cytosol	43.4	8.81
KRH12454	Soybean	cytosol	43.4	8.73
KRH52222	Soybean	cytosol	41.51	8.09
KRH61549	Soybean	cytosol	40.57	7.9
KRH19237	Soybean	cytosol, nucleus, peroxisome	39.62	7.84
KRH05300	Soybean	cytosol	40.57	7.71
KRH02667	Soybean	cytosol, nucleus, peroxisome	38.68	7.62
KRH15739	Soybean	cytosol	38.68	7.36
KRH71372	Soybean	vacuole	24.53	2.42

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	EMBL:ACUP02001280	EnsemblPlantsGene:GLYMA_02G278100
GO:GO:0003674	GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457
UniProt:K7KB73	EnsemblPlants:KRH73525	ProteinID:KRH73525	ProteinID:KRH73525.1	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF518	SUPFAM:SSF81606
UniParc:UPI00023BC9BE	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:46070392..46071507

Molecular Weight (calculated)

12080.6 Da

IEP (calculated)

9.696

GRAVY (calculated)

-0.228

Length

106 amino acids

Sequence
(BLAST)

001: MENRFARMDN EVNRRSQSNQ TFTCRCELQT PHYDVVRSTA VVAIVTSDKL VVSNCGDSRA VLCRKGVAIP LSYDHKKSSG LFYKNPFFTL KISTLFLLQD
101: LCKIRS

Best Arabidopsis Sequence Match ( AT1G07430.1 )
(BLAST)

001: MADICYEDET SACESRPLWS SRKWRIGVQR FRMSPSEMNP TASTTEEEDK SEGIYNKRNK QEEYDFMNCA SSSPSQSSPE EESVSLEDSD VSISDGNSSV
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA

Arabidopsis Description

AIP1Protein phosphatase 2C 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.