CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60215	Soybean	cytoskeleton, cytosol, nucleus	94.03	94.27
VIT_11s0016g03180.t01	Wine grape	nucleus	72.21	70.2
GSMUA_Achr2P09370_001	Banana	cytosol	47.79	56.79
KRH77641	Soybean	plastid	33.77	40.12
KRH27848	Soybean	nucleus	32.47	37.2
KRG97855	Soybean	cytosol	37.4	36.0
KRH31027	Soybean	cytosol	36.88	35.41
KRG94219	Soybean	plastid	34.03	34.75
KRH15068	Soybean	cytosol	35.58	34.25
KRH16556	Soybean	plastid	34.29	34.2
KRH73525	Soybean	cytosol, mitochondrion, peroxisome, plastid	9.35	33.96
KRH73067	Soybean	cytosol	35.84	33.91
KRH52222	Soybean	cytosol	40.26	28.49
KRH61549	Soybean	cytosol	40.0	28.31
KRH05300	Soybean	cytosol	39.74	27.42
KRH37441	Soybean	cytosol	37.14	27.39
KRH15739	Soybean	cytosol	39.22	27.11
KRH12454	Soybean	cytosol	36.62	26.76
KRH19237	Soybean	cytosol, nucleus, peroxisome	36.88	26.49
KRH02667	Soybean	cytosol, nucleus, peroxisome	36.62	26.21
KRH71372	Soybean	vacuole	21.3	7.64

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100793293	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	EMBL:ACUP02004768
EnsemblPlantsGene:GLYMA_08G033800	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	UniProt:I1KPX1	InterPro:IPR001932	InterPro:IPR036457
EnsemblPlants:KRH41498	ProteinID:KRH41498	ProteinID:KRH41498.1	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF357
SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI0002337DBE	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:-:2698240..2704573

Molecular Weight (calculated)

42287.9 Da

IEP (calculated)

5.020

GRAVY (calculated)

-0.343

Length

385 amino acids

Sequence
(BLAST)

001: MDEDEQLERF DSEFASTSSI SSTLSTDDFR NLTSSGDISS ISSGSGEIPP VAVLAPPFLY REGSNDVETA PAPREKCVGR SNKGVSWGHT SVIGRRKEME
101: DAIAVIPGFM SRTCDRVGGC TAPGSRSSGE IAPLHFFGVY DGHGGSQVAK FCAKRMHDVI AEEWDREIGG AAEWQRRWEA VFANSFERTD NEILSDAVAP
201: EMVGSTASVV VLSGCQIITS NCGDSRVVLC RRTQTIPLTV DQKPDRQDEL LRIEGGGGKV INWNGARVFG VLAMSRAIGD RYLRPWIIPV PEITFTARTD
301: EDECLVLASD GLWDVMTNEE VGEVARRILR RRRRSLSMEE TSPAQVVAES LTEIAYGRNS KDNISIIVVD LKSKRKRQQR PPLIS

Best Arabidopsis Sequence Match ( AT1G72770.1 )
(BLAST)

001: MEEMTPAVAM TLSLAANTMC ESSPVEITQL KNVTDAADLL SDSENQSFCN GGTECTMEDV SELEEVGEQD LLKTLSDTRS GSSNVFDEDD VLSVVEDNSA
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GDRYLKPYVI PEPEVTFMPR SREDECLILA SDGLWDVMNN QEVCEIARRR ILMWHKKNGA PPLAERGKGI DPACQAAADY LSMLALQKGS KDNISIIVID
501: LKAQRKFKTR T

Arabidopsis Description

HAB1Protein phosphatase 2C 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.