CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytoskeleton, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41498	Soybean	nucleus	94.27	94.03
VIT_11s0016g03180.t01	Wine grape	nucleus	72.66	70.45
GSMUA_Achr2P09370_001	Banana	cytosol	47.92	56.79
KRH77641	Soybean	plastid	33.85	40.12
KRH27848	Soybean	nucleus	32.29	36.9
KRG97855	Soybean	cytosol	37.76	36.25
KRH31027	Soybean	cytosol	37.76	36.16
KRG94219	Soybean	plastid	34.9	35.54
KRH16556	Soybean	plastid	34.9	34.72
KRH15068	Soybean	cytosol	35.94	34.5
KRH73067	Soybean	cytosol	36.2	34.15
KRH73525	Soybean	cytosol, mitochondrion, peroxisome, plastid	9.38	33.96
KRH52222	Soybean	cytosol	40.89	28.86
KRH61549	Soybean	cytosol	40.1	28.31
KRH37441	Soybean	cytosol	37.24	27.39
KRH05300	Soybean	cytosol	39.06	26.88
KRH12454	Soybean	cytosol	36.72	26.76
KRH15739	Soybean	cytosol	38.54	26.57
KRH19237	Soybean	cytosol, nucleus, peroxisome	36.98	26.49
KRH02667	Soybean	cytosol, nucleus, peroxisome	36.72	26.21
KRH71372	Soybean	vacuole	21.35	7.64

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100782634	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	EMBL:ACUP02003355
EnsemblPlantsGene:GLYMA_05G227100	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0043169	GO:GO:0046872	UniProt:I1K5Y7	InterPro:IPR001932	InterPro:IPR036457
EnsemblPlants:KRH60215	ProteinID:KRH60215	ProteinID:KRH60215.1	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF357
SMART:SM00331	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI00023393EE	SEG:seg	:

Description

hypothetical protein

Coordinates

chr5:-:40527741..40537026

Molecular Weight (calculated)

42157.6 Da

IEP (calculated)

5.210

GRAVY (calculated)

-0.348

Length

384 amino acids

Sequence
(BLAST)

001: MDEDEQLERF DSEFASTSSI SSTLSTDDFR NLTSSGDISS ISSGSGEIPP VSVLAPPFLH CEGSNDGETA AAREKCVGRS NKGVSWGHTS VIGRRKEMED
101: AVAVIPGFMS RTCDHIGGCT APGSRSSGEI APVHFFGVYD GHGGSQVAKF CAKRMHDVIA EEWDREMEGG ARWHRRWETV FANSFERTDN EILSDAVAPE
201: MVGSTASVVI LSGCQIITSN CGDSRVVLYR RTQTIPLTVD QKPDRQDELL RIEGGGGRVI NWNGARVFGV LAMSRAIGDR YLRPWIIPVP EITFTARTDE
301: DECLVLASDG LWDVMTNEEV GEVARHILRR RRRSLSMEEA SPAQVVADSL TEIALGRNSK DNISIIVVDL KSKRKRQQRP PLIS

Best Arabidopsis Sequence Match ( AT1G72770.1 )
(BLAST)

001: MEEMTPAVAM TLSLAANTMC ESSPVEITQL KNVTDAADLL SDSENQSFCN GGTECTMEDV SELEEVGEQD LLKTLSDTRS GSSNVFDEDD VLSVVEDNSA
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GDRYLKPYVI PEPEVTFMPR SREDECLILA SDGLWDVMNN QEVCEIARRR ILMWHKKNGA PPLAERGKGI DPACQAAADY LSMLALQKGS KDNISIIVID
501: LKAQRKFKTR T

Arabidopsis Description

HAB1Protein phosphatase 2C 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.