Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g096670.2.1 | Tomato | nucleus | 94.63 | 95.57 |
| PGSC0003DMT400069947 | Potato | cytosol | 66.83 | 65.55 |
| GSMUA_AchrUn_... | Banana | cytosol | 42.93 | 62.19 |
| CDY67227 | Canola | cytosol | 55.61 | 61.46 |
| CDY67257 | Canola | nucleus | 55.37 | 61.19 |
| Bra002038.1-P | Field mustard | nucleus | 55.37 | 59.74 |
| VIT_13s0019g02200.t01 | Wine grape | plastid | 58.05 | 59.5 |
| AT3G11410.1 | Thale cress | cytosol | 57.8 | 59.4 |
| CDY08530 | Canola | nucleus | 56.1 | 58.52 |
| CDY01017 | Canola | nucleus | 55.61 | 58.02 |
| KXG35986 | Sorghum | cytosol, peroxisome, plastid | 28.29 | 57.14 |
| Bra034845.1-P | Field mustard | nucleus | 55.61 | 57.14 |
| PGSC0003DMT400077989 | Potato | cytosol | 54.88 | 54.88 |
| GSMUA_Achr5P29000_001 | Banana | cytosol | 50.98 | 54.71 |
| GSMUA_Achr11P... | Banana | cytosol | 51.71 | 53.67 |
| GSMUA_Achr6P15180_001 | Banana | cytosol | 48.29 | 53.51 |
| KRH73525 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 13.66 | 52.83 |
| Zm00001d005609_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 43.17 | 50.57 |
| TraesCS3A01G362200.1 | Wheat | nucleus, plastid | 48.05 | 50.38 |
| HORVU3Hr1G085930.3 | Barley | nucleus, plastid | 48.05 | 50.13 |
| TraesCS3D01G355900.1 | Wheat | plastid | 48.29 | 49.87 |
| TraesCS5B01G182000.1 | Wheat | peroxisome | 42.44 | 49.86 |
| HORVU4Hr1G060370.1 | Barley | nucleus | 48.54 | 49.75 |
| Os09t0325700-01 | Rice | cytosol | 43.41 | 49.72 |
| EER96576 | Sorghum | cytosol | 43.17 | 49.58 |
| TraesCS5A01G183600.1 | Wheat | peroxisome | 42.2 | 49.57 |
| TraesCS5D01G188600.1 | Wheat | peroxisome | 42.2 | 49.57 |
| TraesCS4B01G210100.1 | Wheat | nucleus | 49.02 | 49.51 |
| Os03t0268600-01 | Rice | nucleus | 48.78 | 49.51 |
| TraesCS4D01G210900.1 | Wheat | nucleus | 49.02 | 49.02 |
| Zm00001d042886_P001 | Maize | nucleus | 48.78 | 49.02 |
| Zm00001d020100_P001 | Maize | mitochondrion, nucleus, peroxisome, plastid | 42.2 | 48.32 |
| EES01744 | Sorghum | plastid | 48.54 | 48.3 |
| Zm00001d028574_P001 | Maize | nucleus | 46.59 | 48.23 |
| TraesCS4A01G094300.1 | Wheat | nucleus | 48.05 | 48.17 |
| PGSC0003DMT400094534 | Potato | cytosol | 23.41 | 48.0 |
| EER92493 | Sorghum | nucleus | 46.83 | 47.88 |
| Os01t0846300-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 48.29 | 47.83 |
| PGSC0003DMT400019552 | Potato | cytosol, peroxisome, plastid | 12.44 | 47.66 |
| Zm00001d012401_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 47.56 | 47.22 |
| TraesCS3B01G394600.3 | Wheat | plastid | 48.29 | 46.26 |
| PGSC0003DMT400091100 | Potato | cytosol, nucleus, plastid | 35.12 | 42.11 |
| PGSC0003DMT400090149 | Potato | cytosol | 33.9 | 41.87 |
| PGSC0003DMT400021210 | Potato | cytosol, nucleus, peroxisome | 9.02 | 41.11 |
| KXG22152 | Sorghum | nucleus | 45.61 | 40.3 |
| PGSC0003DMT400023517 | Potato | nucleus | 36.1 | 37.09 |
| PGSC0003DMT400050448 | Potato | cytosol | 31.95 | 32.91 |
| PGSC0003DMT400075333 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 35.61 | 27.24 |
| PGSC0003DMT400046382 | Potato | cytosol | 35.61 | 26.84 |
| PGSC0003DMT400006608 | Potato | plastid | 35.61 | 26.79 |
| PGSC0003DMT400078131 | Potato | golgi, vacuole | 19.27 | 25.24 |
| PGSC0003DMT400057134 | Potato | mitochondrion | 14.39 | 20.21 |
| PGSC0003DMT400049695 | Potato | extracellular | 2.93 | 10.91 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | EntrezGene:102599348 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 |
| GO:GO:0046872 | InterPro:IPR001932 | InterPro:IPR036457 | UniProt:M1BE62 | PFAM:PF00481 | EnsemblPlantsGene:PGSC0003DMG400016742 |
| PGSC:PGSC0003DMG400016742 | EnsemblPlants:PGSC0003DMT400043146 | InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom |
| ScanProsite:PS01032 | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF518 | SMART:SM00331 | SMART:SM00332 |
| SUPFAM:SSF81606 | UniParc:UPI0002954332 | RefSeq:XP_006344582.1 | SEG:seg | : | : |
Description
Protein phosphatase 2C AHG3 homolog [Source:PGSC_GENE;Acc:PGSC0003DMG400016742]
Coordinates
chr3:-:33835547..33837491
Molecular Weight (calculated)
45087.7 Da
IEP (calculated)
6.425
GRAVY (calculated)
-0.403
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFGETKTVT PTEPSTEAAR RRRMEIHQFR FVASDMAVAP PTSMENGGRK RQKLEKTVSV KSYDSKEKKR FKLERIVSLP LSLPCTSEIE MGKKKLAENK
101: ETETNALDLT ESASISLNIE RQGVSDCPKF GMTSVCGRRR DMEDTVSIYP SFLQDKHEKS SNLHFFGLYD GHGCSHAAMK CKDRMHEIVK NEVESAGEAT
201: WKEMMSQSFS KMDKEVVEYS KGAGGTHTVD CRCELQTPQC DAVGSTAVVA VLTPNKIVVS NCGDSRAVLC RNGIPIPLST DHKPDRPDEL NRIEEAGGRV
301: IYWDGARVLG VLAMSRAIGD SYLKPYVTSE PEVTITERTV EDECLILASD GLWDVVSNET ACGVARMCLR SGQSSDQACT DASILLTRLA LARHSSDNVS
401: VVVVDLKGGL
101: ETETNALDLT ESASISLNIE RQGVSDCPKF GMTSVCGRRR DMEDTVSIYP SFLQDKHEKS SNLHFFGLYD GHGCSHAAMK CKDRMHEIVK NEVESAGEAT
201: WKEMMSQSFS KMDKEVVEYS KGAGGTHTVD CRCELQTPQC DAVGSTAVVA VLTPNKIVVS NCGDSRAVLC RNGIPIPLST DHKPDRPDEL NRIEEAGGRV
301: IYWDGARVLG VLAMSRAIGD SYLKPYVTSE PEVTITERTV EDECLILASD GLWDVVSNET ACGVARMCLR SGQSSDQACT DASILLTRLA LARHSSDNVS
401: VVVVDLKGGL
001: MAGICCGVVG ETEPAAPVDS TSRASLRRRL DLLPSIKIVA DSAVAPPLEN CRKRQKRETV VLSTLPGNLD LDSNVRSENK KARSAVTNSN SVTEAESFFS
101: DVPKIGTTSV CGRRRDMEDA VSIHPSFLQR NSENHHFYGV FDGHGCSHVA EKCRERLHDI VKKEVEVMAS DEWTETMVKS FQKMDKEVSQ RECNLVVNGA
201: TRSMKNSCRC ELQSPQCDAV GSTAVVSVVT PEKIIVSNCG DSRAVLCRNG VAIPLSVDHK PDRPDELIRI QQAGGRVIYW DGARVLGVLA MSRAIGDNYL
301: KPYVIPDPEV TVTDRTDEDE CLILASDGLW DVVPNETACG VARMCLRGAG AGDDSDAAHN ACSDAALLLT KLALARQSSD NVSVVVVDLR KRRNNQASS
101: DVPKIGTTSV CGRRRDMEDA VSIHPSFLQR NSENHHFYGV FDGHGCSHVA EKCRERLHDI VKKEVEVMAS DEWTETMVKS FQKMDKEVSQ RECNLVVNGA
201: TRSMKNSCRC ELQSPQCDAV GSTAVVSVVT PEKIIVSNCG DSRAVLCRNG VAIPLSVDHK PDRPDELIRI QQAGGRVIYW DGARVLGVLA MSRAIGDNYL
301: KPYVIPDPEV TVTDRTDEDE CLILASDGLW DVVPNETACG VARMCLRGAG AGDDSDAAHN ACSDAALLLT KLALARQSSD NVSVVVVDLR KRRNNQASS
Arabidopsis Description
PP2CAProtein phosphatase 2C 37 [Source:UniProtKB/Swiss-Prot;Acc:P49598]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.